RNA–Protein interactions for RNA: ENST00000615517.4

MUC1-227, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 951 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-227ENST00000615517 SERTAD4-AS1Q5TG53 156 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 IL1F10Q8WWZ1 152 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 EDARADDQ8WWZ3 215 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 ASB9Q96DX5 294 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 FANCD2OSQ96PS1 177 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 IL4I1Q96RQ9 567 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 ELAC2Q9BQ52 826 aaKnown RBP4.89□□□□□ -1.63
MUC1-227ENST00000615517 C11orf54Q9H0W9 315 aaPredicted RBP4.89□□□□□ -1.63
MUC1-227ENST00000615517 ZNF556Q9HAH1 456 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 SPACA1Q9HBV2 294 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 SLC35D1Q9NTN3 355 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 WARS2Q9UGM6 360 aaKnown RBP4.89□□□□□ -1.63
MUC1-227ENST00000615517 STEAP1Q9UHE8 339 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 PEX16Q9Y5Y5 336 aa4.89□□□□□ -1.63
MUC1-227ENST00000615517 NBDYA0A0U1RRE5 68 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 ITGB1BP1O14713 200 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 CST1P01037 141 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 APOA2P02652 100 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 SMR3BP02814 79 aaPredicted RBP4.88□□□□□ -1.63
MUC1-227ENST00000615517 CLEC3BP05452 202 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 GTF2F2P13984 249 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 RPA2P15927 270 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 ELLP55199 621 aaPredicted RBP4.88□□□□□ -1.63
MUC1-227ENST00000615517 RPS27AP62979 156 aaKnown RBP4.88□□□□□ -1.63
MUC1-227ENST00000615517 FAM98BQ52LJ0 330 aaKnown RBP4.88□□□□□ -1.63
MUC1-227ENST00000615517 C12orf73Q69YU5 71 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 LAMTOR1Q6IAA8 161 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 IDO2Q6ZQW0 420 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 CEACAM19Q7Z692 300 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 GID4Q8IVV7 300 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 CPNE2Q96FN4 548 aaPredicted RBP4.88□□□□□ -1.63
MUC1-227ENST00000615517 HARBI1Q96MB7 349 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 ZNF436Q9C0F3 470 aaPredicted RBP4.88□□□□□ -1.63
MUC1-227ENST00000615517 OR1A1Q9P1Q5 309 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 UFC1Q9Y3C8 167 aa4.88□□□□□ -1.63
MUC1-227ENST00000615517 MFSD2BA6NFX1 497 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 HMX3A6NHT5 357 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 KRTAP29-1A8MX34 341 aaPredicted RBP4.87□□□□□ -1.63
MUC1-227ENST00000615517 TEX22C9J3V5 150 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 ANXA8P13928 327 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 MYOD1P15172 320 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 PSMB6P28072 239 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 FUSP35637 526 aaKnown RBP eCLIP4.87□□□□□ -1.63
MUC1-227ENST00000615517 ZNF93P35789 620 aaPredicted RBP4.87□□□□□ -1.63
MUC1-227ENST00000615517 SOX2P48431 317 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 CENPSQ8N2Z9 138 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 SYT8Q8NBV8 401 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 ACOT12Q8WYK0 555 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 TMEM190Q8WZ59 177 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 EEF1AKMT3Q96AZ1 226 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 CMTM5Q96DZ9 223 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 PDCD1LG2Q9BQ51 273 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 JAM3Q9BX67 310 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 YTHDF1Q9BYJ9 559 aaKnown RBP4.87□□□□□ -1.63
MUC1-227ENST00000615517 BANF2Q9H503 90 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 ZNF430Q9H8G1 570 aaPredicted RBP4.87□□□□□ -1.63
MUC1-227ENST00000615517 PLA2G2DQ9UNK4 145 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 LRRC42Q9Y546 428 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 ETV7Q9Y603 341 aa4.87□□□□□ -1.63
MUC1-227ENST00000615517 LRP2P98164 4655 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 A0A1B0GW64 132 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 ZAR1LA6NP61 321 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 E7EUB6 86 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 E9PI62 339 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 F8W735 103 aaPredicted RBP4.86□□□□□ -1.63
MUC1-227ENST00000615517 J3QLW9 94 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 J3QRE1 110 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 M0R1X1 148 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 SLC16A6O15403 523 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 CCDC22O60826 627 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 ZNF780AO75290 641 aaPredicted RBP4.86□□□□□ -1.63
MUC1-227ENST00000615517 GLAP06280 429 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 RAP2AP10114 183 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 ZNF19P17023 458 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 C4BPBP20851 252 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 FUT3P21217 361 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 CAPGP40121 348 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 CEACAM6P40199 344 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 TFPI2P48307 235 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 DAPP51397 102 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 MS4A2Q01362 244 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 KLK9Q2XQG4 91 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 DDI2Q5TDH0 399 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 GLT8D1Q68CQ7 371 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 SSX9Q7RTT3 188 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 TEX45Q8NA69 505 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 CSNK1G2-AS1Q8NCQ2 148 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 ZNRF2Q8NHG8 242 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 ORAI1Q96D31 301 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 C5orf30Q96GV9 206 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 C17orf77Q96MU5 243 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 RNF2Q99496 336 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 S100A13Q99584 98 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 PAK1IP1Q9NWT1 392 aaPredicted RBP4.86□□□□□ -1.63
MUC1-227ENST00000615517 KLK9Q9UKQ9 250 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 ZNF257Q9Y2Q1 563 aa4.86□□□□□ -1.63
MUC1-227ENST00000615517 DNAH8Q96JB1 4490 aa4.85□□□□□ -1.63
MUC1-227ENST00000615517 IGHV3OR16-8A0A075B7F1 116 aa4.85□□□□□ -1.63
MUC1-227ENST00000615517 NPIPB5A8MRT5 1133 aa4.85□□□□□ -1.63
MUC1-227ENST00000615517 ZNF207O43670 478 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms