RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 NAA60Q9H7X0 242 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 POMT1Q9Y6A1 747 aa11.81□□□□□ -0.52
CD48-203ENST00000613788 SONP18583 2426 aaKnown RBP11.8□□□□□ -0.52
CD48-203ENST00000613788 H0Y980 276 aa11.8□□□□□ -0.52
CD48-203ENST00000613788 ANXA3P12429 323 aa11.8□□□□□ -0.52
CD48-203ENST00000613788 RAG2P55895 527 aa11.8□□□□□ -0.52
CD48-203ENST00000613788 DHODHQ02127 395 aa11.8□□□□□ -0.52
CD48-203ENST00000613788 OR2B11Q5JQS5 317 aa11.8□□□□□ -0.52
CD48-203ENST00000613788 TMEM86BQ8N661 226 aa11.8□□□□□ -0.52
CD48-203ENST00000613788 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
CD48-203ENST00000613788 MARVELD1Q9BSK0 173 aa11.8□□□□□ -0.52
CD48-203ENST00000613788 HOXA3O43365 443 aaPredicted RBP11.79□□□□□ -0.52
CD48-203ENST00000613788 PEX14O75381 377 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 CRYZL1O95825 349 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 HPRT1P00492 218 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 IGHV4-59P01825 116 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 IGKV1-16P04430 117 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 SERPINE2P07093 398 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 TMEM11P17152 192 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 ANXA7P20073 488 aaKnown RBP11.79□□□□□ -0.52
CD48-203ENST00000613788 MECP2P51608 486 aaKnown RBP11.79□□□□□ -0.52
CD48-203ENST00000613788 RPS16P62249 146 aaKnown RBP11.79□□□□□ -0.52
CD48-203ENST00000613788 TMEM177Q53S58 311 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 CCBE1Q6UXH8 406 aaPredicted RBP11.79□□□□□ -0.52
CD48-203ENST00000613788 OSR1Q8TAX0 266 aaPredicted RBP11.79□□□□□ -0.52
CD48-203ENST00000613788 GALNT14Q96FL9 552 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 JMJD8Q96S16 334 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 AIFM2Q9BRQ8 373 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 TCF19Q9Y242 345 aa11.79□□□□□ -0.52
CD48-203ENST00000613788 INMT-MINDY4F8WBC2 141 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 SHOXO15266 292 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 RAMP3O60896 148 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 DHFRP00374 187 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 IFNA2P01563 188 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 OR5AC1P0C628 307 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 OR4E1P0C645 316 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 RPA2P15927 270 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 VAMP1P23763 118 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 LPAR6P43657 344 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 LGALS7P47929 136 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 BRWD1-AS2P59051 145 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 HNF4GQ14541 408 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 SP6Q3SY56 376 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 C4orf46Q504U0 113 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 OR8H1Q8NGG4 311 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 TP53RKQ96S44 253 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 PLEKHA2Q9HB19 425 aa11.78□□□□□ -0.52
CD48-203ENST00000613788 A0A0A6YYJ9 748 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 PIGBOS1A0A0B4J2F0 54 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 A6NDX4 124 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 SFT2D2O95562 160 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 HRASP01112 189 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 UCP1P25874 307 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 RAB25P57735 213 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 SUPT4H1P63272 117 aaKnown RBP11.77□□□□□ -0.52
CD48-203ENST00000613788 PPP1R1AQ13522 171 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 LY6EQ16553 131 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 TRIM16LQ309B1 348 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 ZNF585BQ52M93 769 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 LIAT1Q6ZQX7 453 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 MINDY2Q8NBR6 621 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 GLYATL2Q8WU03 294 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 HARBI1Q96MB7 349 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 TSNAXQ99598 290 aaKnown RBP11.77□□□□□ -0.52
CD48-203ENST00000613788 TMEM222Q9H0R3 208 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 BEX1Q9HBH7 125 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 C1RLQ9NZP8 487 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 VPREB3Q9UKI3 123 aa11.77□□□□□ -0.52
CD48-203ENST00000613788 MXRA5Q9NR99 2828 aa11.77□□□□□ -0.53
CD48-203ENST00000613788 C9orf170A2RU37 121 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 HLA-AP01891 365 aaKnown RBP11.76□□□□□ -0.53
CD48-203ENST00000613788 IL5P05113 134 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 VSIG10L2P0DP72 767 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 SPNP16150 400 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 HILS1P60008 231 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 SRPXP78539 464 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 C16orf82Q7Z2V1 217 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 LYG2Q86SG7 212 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 Q8N6K4 173 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 RBM14Q96PK6 669 aaKnown RBP11.76□□□□□ -0.53
CD48-203ENST00000613788 RAB18Q9NP72 206 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 TNFRSF19Q9NS68 423 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 COMMD9Q9P000 198 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 NCBP2LA6PVI3 153 aaKnown RBP11.76□□□□□ -0.53
CD48-203ENST00000613788 CLDN34H7C241 214 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 PRAF2O60831 178 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 ATG12O94817 140 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 OR2F2O95006 317 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 CDS2O95674 445 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 NQO2P16083 231 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 TMEM187Q14656 261 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 OXA1LQ15070 435 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 MMDQ15546 238 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 SLC9A3R2Q15599 337 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 ZNF695Q8IW36 515 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 NPBQ8NG41 125 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 RITA1Q96K30 269 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 SLC25A33Q9BSK2 321 aa11.76□□□□□ -0.53
CD48-203ENST00000613788 GPN1Q9HCN4 374 aaPredicted RBP11.76□□□□□ -0.53
CD48-203ENST00000613788 KIAA1456Q9P272 454 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms