RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 SLC7A10Q9NS82 523 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 NSG2Q9Y328 171 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 UBE2J1Q9Y385 318 aaPredicted RBP9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 ICE1Q9Y2F5 2266 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF462Q96JM2 2506 aa9.1□□□□□ -0.95
PCDHGC3-202ENST00000611950 RNF212BA8MTL3 300 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 TNFSF13O75888 250 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 HLA-HP01893 362 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 GPM6AP51674 278 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 RANP62826 216 aaKnown RBP9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 MALLQ13021 153 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 TCTEX1D4Q5JR98 221 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 LIAT1Q6ZQX7 453 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 C17orf78Q8N4C9 275 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 MSI2Q96DH6 328 aaKnown RBP9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 PIMREGQ9BSJ6 248 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 ZNF286AQ9HBT8 521 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 CLN8Q9UBY8 286 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 MED12LQ86YW9 2145 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 BORCS7-ASMTA0A0B4J1R7 106 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 A0A1B0GU03 582 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 ST8SIA3O43173 380 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 PPYP01298 95 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 CXCL1P09341 107 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 TCN2P20062 427 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 BCL3P20749 454 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 GDF1P27539 372 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 RPL32P62910 135 aaKnown RBP9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 MRPS34P82930 218 aaKnown RBP9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 EIF3IQ13347 325 aaKnown RBP9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 UNQ5815/PRO19632Q6UWF5 114 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 WDR82Q6UXN9 313 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 SSBP4Q9BWG4 385 aaPredicted RBP9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 DKK4Q9UBT3 224 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 VAX2Q9UIW0 290 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 NAV2Q8IVL1 2488 aa9.09□□□□□ -0.95
PCDHGC3-202ENST00000611950 IGKV1D-13A0A0B4J2D9 117 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 IGSF23A1L1A6 192 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 PINLYPA6NC86 204 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 SCGB2A1O75556 95 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 IGKV1-13P0DP09 117 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 OR10J1P30954 320 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 EWSR1Q01844 656 aaKnown RBP eCLIP9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 Q0VFX4 171 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 C3AR1Q16581 482 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 C5orf47Q569G3 176 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 SPINK14Q6IE38 97 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 OR2G3Q8NGZ4 309 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 OR51H1Q8NH63 302 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 TMEM171Q8WVE6 324 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 HES7Q9BYE0 225 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 GPR35Q9HC97 309 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 KCNJ16Q9NPI9 418 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 DEPPQ9NTK1 212 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 ONECUT1Q9UBC0 465 aa9.09□□□□□ -0.96
PCDHGC3-202ENST00000611950 CFAP46Q8IYW2 2715 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 hCG_38984A0A1B0GV85 526 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 HS3ST1O14792 307 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 PDE6DO43924 150 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 P04436 131 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 DANCRP0C864 163 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 ATP5IP56385 69 aaPredicted RBP9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 SMAGPQ0VAQ4 97 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 ZNF343Q6P1L6 599 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 TBC1D26Q86UD7 250 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 GGNQ86UU5 652 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 NIT1Q86X76 327 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 ZNF695Q8IW36 515 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 LGI3Q8N145 548 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 GAPTQ8N292 157 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 SMIM20Q8N5G0 67 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 C1orf162Q8NEQ5 155 aaPredicted RBP9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 IL1F10Q8WWZ1 152 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 GINS3Q9BRX5 216 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 RBKSQ9H477 322 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 PSG8Q9UQ74 426 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 ATMQ13315 3056 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 MAST4O15021 2626 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 C3orf85A0A1B0GTC6 90 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 KITLGP21583 273 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 ATP6V0CP27449 155 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 FOLR3P41439 243 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 P2RY1P47900 373 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 CLDN15P56746 228 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 VAMP3Q15836 100 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 ZNF818PQ6ZRF7 136 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 OR5C1Q8NGR4 320 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 OR10X1Q8NGY0 326 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 RDH5Q92781 318 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 MOB3AQ96BX8 217 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 OR2H1Q9GZK4 316 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 CALHM2Q9HA72 323 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 LIPGQ9Y5X9 500 aa9.08□□□□□ -0.96
PCDHGC3-202ENST00000611950 C5orf49A4QMS7 147 aa9.07□□□□□ -0.96
PCDHGC3-202ENST00000611950 H0YL77 283 aa9.07□□□□□ -0.96
PCDHGC3-202ENST00000611950 GPR137BO60478 399 aa9.07□□□□□ -0.96
PCDHGC3-202ENST00000611950 PDCD6O75340 191 aa9.07□□□□□ -0.96
PCDHGC3-202ENST00000611950 GAPDHP04406 335 aaKnown RBP9.07□□□□□ -0.96
PCDHGC3-202ENST00000611950 RBM11P57052 281 aaKnown RBP9.07□□□□□ -0.96
PCDHGC3-202ENST00000611950 ZNF154Q13106 437 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms