RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 MUC6Q6W4X9 2439 aa8.66□□□□□ -1.02
PABPC1-224ENST00000610907 USF3Q68DE3 2245 aa8.66□□□□□ -1.02
PABPC1-224ENST00000610907 KBTBD11-OT1A0A1B0GTJ5 212 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 A0A1W2PPE2 198 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 C5orf52A6NGY3 159 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 M0R1X1 148 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 FCGR3BO75015 233 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 MPDU1O75352 247 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 FGF7P21781 194 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 CD40P25942 277 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 TNFAIP6P98066 277 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-224ENST00000610907 FAM90A2PQ658T7 463 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 TMEM108Q6UXF1 575 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 HEPN1Q6WQI6 88 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 RPP25LQ8N5L8 163 aaKnown RBP8.65□□□□□ -1.02
PABPC1-224ENST00000610907 ZNRF1Q8ND25 227 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 OR4A16Q8NH70 328 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 CORO2AQ92828 525 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 ACTR3CQ9C0K3 210 aaPredicted RBP8.65□□□□□ -1.02
PABPC1-224ENST00000610907 IFI27L2Q9H2X8 130 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 ZNF665Q9H7R5 613 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 LINC00574Q9H8X3 128 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 GCM1Q9NP62 436 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 GFOD1Q9NXC2 390 aa8.65□□□□□ -1.02
PABPC1-224ENST00000610907 IGHV3OR15-7A0A075B7D8 119 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 TRGV10A0A0A0MS01 117 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 ZFP92A6NM28 416 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 TMEM250H0YL14 139 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 UBE2CO00762 179 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 PRRG2O14669 202 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 CYB5BO43169 146 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 IGHV1-46P01743 117 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 S100A8P05109 93 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 FBP1P09467 338 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 THBS3P49746 956 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 AKR1D1P51857 326 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 CEBPGP53567 150 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 EDDM3BP56851 147 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 RAB11AP62491 216 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 C17orf58Q2M2W7 97 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 TMEM249Q2WGJ8 235 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 PRAMEF5Q5TYX0 476 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 STUMQ69YW2 141 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 ADAM5Q6NVV9 412 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 ZFP82Q8N141 532 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 RPRMLQ8N4K4 120 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 OR10G9Q8NGN4 311 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 OR10G7Q8NGN6 311 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 OR4S2Q8NH73 311 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 C2CD4CQ8TF44 421 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 DDB2Q92466 427 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 QTRT1Q9BXR0 403 aaKnown RBP8.65□□□□□ -1.03
PABPC1-224ENST00000610907 NPCDR1Q9BY65 106 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 MANBALQ9NQG1 85 aa8.65□□□□□ -1.03
PABPC1-224ENST00000610907 METTL1Q9UBP6 276 aaKnown RBP8.65□□□□□ -1.03
PABPC1-224ENST00000610907 PRR14LQ5THK1 2151 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ZNF98A6NK75 572 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ZNF729A6NN14 1252 aaPredicted RBP8.64□□□□□ -1.03
PABPC1-224ENST00000610907 C15orf62A8K5M9 175 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 TGOLN2O43493 480 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 CD55P08174 381 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 IRF2P14316 349 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 RPL35P42766 123 aaKnown RBP8.64□□□□□ -1.03
PABPC1-224ENST00000610907 PSMB3P49720 205 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ZNF134P52741 427 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ELLP55199 621 aaPredicted RBP8.64□□□□□ -1.03
PABPC1-224ENST00000610907 TMPRSS3P57727 454 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 FAM27E3Q08E93 113 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 LTC4SQ16873 150 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ACOT6Q3I5F7 207 aaPredicted RBP8.64□□□□□ -1.03
PABPC1-224ENST00000610907 TEX36Q5VZQ5 186 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ALKBH2Q6NS38 261 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ACSM6Q6P461 480 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 VHLLQ6RSH7 139 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ZNF788Q6ZQV5 615 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 SSX7Q7RTT5 188 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 OR10A7Q8NGE5 316 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 ZDHHC16Q969W1 377 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 CTDSP1Q9GZU7 261 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 SDF2L1Q9HCN8 221 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
PABPC1-224ENST00000610907 CNOT1A5YKK6 2376 aaKnown RBP8.64□□□□□ -1.03
PABPC1-224ENST00000610907 TRGV8A0A0C4DH27 118 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 hCG_1809904A0A1W2PP81 198 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 A0A1W2PR64 198 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 A0A1W2PRV1 198 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 C16orf97H3BN30 126 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 CYB5R3P00387 301 aaPredicted RBP8.63□□□□□ -1.03
PABPC1-224ENST00000610907 IGKV1D-33P01593 117 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 IGKV1-33P01594 117 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 TNFRSF1AP19438 455 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 CD1BP29016 333 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 VDAC2P45880 294 aaPredicted RBP8.63□□□□□ -1.03
PABPC1-224ENST00000610907 FGF8P55075 233 aaPredicted RBP8.63□□□□□ -1.03
PABPC1-224ENST00000610907 OR2B8PP59922 312 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 SNRPEP62304 92 aaKnown RBP8.63□□□□□ -1.03
PABPC1-224ENST00000610907 RELBQ01201 579 aa8.63□□□□□ -1.03
PABPC1-224ENST00000610907 MEF2BQ02080 365 aaPredicted RBP8.63□□□□□ -1.03
PABPC1-224ENST00000610907 POU2AF1Q16633 256 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms