RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ZDHHC16Q969W1 377 aa23.16■■□□□ 1.3
CSPG5-205ENST00000610462 LINC00574Q9H8X3 128 aa23.16■■□□□ 1.3
CSPG5-205ENST00000610462 OR9G9P0C7N8 305 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 NFYBP25208 207 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 RAB2AP61019 212 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 ATP6V1FQ16864 119 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 ZNF436-AS1Q8NC38 126 aaPredicted RBP23.15■■□□□ 1.3
CSPG5-205ENST00000610462 S1PR3Q99500 378 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 RARRES2Q99969 163 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 IDI2-AS1Q9NZ38 188 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 PIEZO2Q9H5I5 2752 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 NKX6-3A6NJ46 265 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 SERF2P84101 59 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 TLE1Q04724 770 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 AARDQ4LEZ3 155 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 ZCCHC24Q8N2G6 241 aaKnown RBP23.15■■□□□ 1.3
CSPG5-205ENST00000610462 QTRT1Q9BXR0 403 aaKnown RBP23.15■■□□□ 1.3
CSPG5-205ENST00000610462 EGLN1Q9GZT9 426 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 PTPRQQ9UMZ3 2332 aa23.15■■□□□ 1.3
CSPG5-205ENST00000610462 PMS2P5A8MQ11 134 aa23.14■■□□□ 1.29
CSPG5-205ENST00000610462 CEBPZOSA8MTT3 80 aa23.14■■□□□ 1.29
CSPG5-205ENST00000610462 ATXN7O15265 892 aaPredicted RBP23.14■■□□□ 1.29
CSPG5-205ENST00000610462 DDB2Q92466 427 aa23.14■■□□□ 1.29
CSPG5-205ENST00000610462 TAF15Q92804 592 aaKnown RBP eCLIP23.14■■□□□ 1.29
CSPG5-205ENST00000610462 TRAV1-1A0A0B4J248 108 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 TMEM30BQ3MIR4 351 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 C1orf229Q6ZS94 237 aaPredicted RBP23.13■■□□□ 1.29
CSPG5-205ENST00000610462 KDF1Q8NAX2 398 aaPredicted RBP23.13■■□□□ 1.29
CSPG5-205ENST00000610462 RBMXL1Q96E39 390 aaKnown RBP23.13■■□□□ 1.29
CSPG5-205ENST00000610462 RPRMQ9NS64 109 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 MLXQ9UH92 298 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 DOCK11Q5JSL3 2073 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 PCNX1Q96RV3 2341 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 TRAV38-1A0A0B4J264 116 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 UBE2L5PA0A1B0GUS4 154 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 ZNF439Q8NDP4 499 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 SAP30LQ9HAJ7 183 aa23.13■■□□□ 1.29
CSPG5-205ENST00000610462 TRGV8A0A0C4DH27 118 aa23.12■■□□□ 1.29
CSPG5-205ENST00000610462 A0A1W2PPE3 182 aa23.12■■□□□ 1.29
CSPG5-205ENST00000610462 PRAMEF5Q5TYX0 476 aa23.12■■□□□ 1.29
CSPG5-205ENST00000610462 ERVK-16P61578 105 aa23.12■■□□□ 1.29
CSPG5-205ENST00000610462 NCMAPQ5T1S8 102 aa23.12■■□□□ 1.29
CSPG5-205ENST00000610462 TMEM147Q9BVK8 224 aa23.12■■□□□ 1.29
CSPG5-205ENST00000610462 TIMM9Q9Y5J7 89 aa23.12■■□□□ 1.29
CSPG5-205ENST00000610462 SAA2-SAA4A0A096LPE2 208 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 SHISA9B4DS77 424 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 TMPRSS2O15393 492 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 NDUFA2O43678 99 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 SAA2P0DJI9 122 aaPredicted RBP23.11■■□□□ 1.29
CSPG5-205ENST00000610462 NQO2P16083 231 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 SPINK9Q5DT21 86 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 C1orf87Q8N0U7 546 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 OR10P1Q8NGE3 313 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 PINX1Q96BK5 328 aaKnown RBP23.11■■□□□ 1.29
CSPG5-205ENST00000610462 VSIRQ9H7M9 311 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 RAXQ9Y2V3 346 aa23.11■■□□□ 1.29
CSPG5-205ENST00000610462 hADV38S2A0JD32 116 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 OR2B8PP59922 312 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 SSX9Q7RTT3 188 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 OR4A16Q8NH70 328 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 ZNF251Q9BRH9 671 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 LY86O95711 162 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 OR13C7P0DN81 318 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 THBS3P49746 956 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 OR4S2Q8NH73 311 aa23.1■■□□□ 1.29
CSPG5-205ENST00000610462 TMEM178BH3BS89 294 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 NDUFB7P17568 137 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 MRPS11P82912 194 aaKnown RBP23.09■■□□□ 1.29
CSPG5-205ENST00000610462 HAGHQ16775 308 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 ZNF506Q5JVG8 444 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 CENPVQ7Z7K6 275 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-205ENST00000610462 DMRTC2Q8IXT2 367 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-205ENST00000610462 MBD3L1Q8WWY6 194 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 RNASE6Q93091 150 aaKnown RBP23.09■■□□□ 1.29
CSPG5-205ENST00000610462 SAV1Q9H4B6 383 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-205ENST00000610462 LINC00312Q9Y6C7 94 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 PPIAL4EA0A075B759 164 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 PPIAL4DF5H284 164 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 IFNA17P01571 189 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 PPIAL4FP0DN26 164 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 CASP6P55212 293 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 SPCS3P61009 180 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 TMEM41BQ5BJD5 291 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 LYG1Q8N1E2 194 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 CLDND2Q8NHS1 167 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 ADTRPQ96IZ2 230 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 CEP295Q9C0D2 2601 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 SLC25A10Q9UBX3 287 aaPredicted RBP23.09■■□□□ 1.29
CSPG5-205ENST00000610462 RPUSD1Q9UJJ7 312 aaKnown RBP23.09■■□□□ 1.29
CSPG5-205ENST00000610462 PPIAL4AQ9Y536 164 aa23.09■■□□□ 1.29
CSPG5-205ENST00000610462 E7EQL1 145 aa23.08■■□□□ 1.29
CSPG5-205ENST00000610462 MMP23AO75900 390 aa23.08■■□□□ 1.29
CSPG5-205ENST00000610462 GNB2P62879 340 aa23.08■■□□□ 1.29
CSPG5-205ENST00000610462 OR52E5Q8NH55 327 aa23.08■■□□□ 1.29
CSPG5-205ENST00000610462 YLPM1P49750 1951 aaKnown RBP23.07■■□□□ 1.28
CSPG5-205ENST00000610462 SCAF4O95104 1147 aaKnown RBP23.07■■□□□ 1.28
CSPG5-205ENST00000610462 MEF2CQ06413 473 aaPredicted RBP23.07■■□□□ 1.28
CSPG5-205ENST00000610462 ICAM4Q14773 271 aa23.07■■□□□ 1.28
CSPG5-205ENST00000610462 ZNF726P1Q15940 193 aa23.07■■□□□ 1.28
CSPG5-205ENST00000610462 VKORC1L1Q8N0U8 176 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms