RNA–Protein interactions for RNA: ENST00000608568.1

SSX9-202, Transcript of Protein SSX9, humanhuman

TSL 4 BASIC

Gene SSX9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9-202ENST00000608568 ZNF141Q15928 474 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 MEP1BQ16820 701 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 ABCA11PQ4W5N1 156 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 SPIN3Q5JUX0 258 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 C1QL3Q5VWW1 255 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 ZNF324BQ6AW86 544 aaPredicted RBP4.32□□□□□ -1.72
SSX9-202ENST00000608568 ASPHD2Q6ICH7 369 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 OR4A47Q6IF82 309 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 IGFL2Q6UWQ7 119 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 IGFL3Q6UXB1 125 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 MEX3BQ6ZN04 569 aaKnown RBP4.32□□□□□ -1.72
SSX9-202ENST00000608568 LINC00696Q6ZRV3 163 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.32□□□□□ -1.72
SSX9-202ENST00000608568 DEFB125Q8N687 156 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 TMEM252Q8N6L7 170 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 ZNF709Q8N972 641 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 ZIC4Q8N9L1 334 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 SLC16A11Q8NCK7 471 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 ZNF740Q8NDX6 193 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 CSNK2A3Q8NEV1 391 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 OR4P4Q8NGL7 312 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 OR10AC1Q8NH08 325 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 OR52N5Q8NH56 324 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 SCGB1C1Q8TD33 95 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 VN1R17PQ8TDU5 208 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 OR5P3Q8WZ94 311 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 ADIPOR1Q96A54 375 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 TMEM186Q96B77 213 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 SIGLEC12Q96PQ1 595 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 ATP6V0BQ99437 205 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 HSPB9Q9BQS6 159 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 TM2D1Q9BX74 207 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 TMEM59Q9BXS4 323 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 HES7Q9BYE0 225 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 SAMD10Q9BYL1 202 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 AICDAQ9GZX7 198 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 MEGF9Q9H1U4 602 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 CALHM2Q9HA72 323 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 TUBG2Q9NRH3 451 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 PLSCR4Q9NRQ2 329 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 C1RLQ9NZP8 487 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 C5AR2Q9P296 337 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 GNG13Q9P2W3 67 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 RCL1Q9Y2P8 373 aaKnown RBP4.32□□□□□ -1.72
SSX9-202ENST00000608568 RNF115Q9Y4L5 304 aa4.32□□□□□ -1.72
SSX9-202ENST00000608568 RAI1Q7Z5J4 1906 aaPredicted RBP4.32□□□□□ -1.72
SSX9-202ENST00000608568 SONP18583 2426 aaKnown RBP4.32□□□□□ -1.72
SSX9-202ENST00000608568 IGLV3-12A0A075B6K2 115 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 TRAV9-2A0A087WT02 112 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 IGHV1-45A0A0A0MS14 117 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 NPIPA5A0A0B4J1W7 369 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 KRTAP9-6A0A140TA67 174 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 LOC102725191A0A1B0GVB3 256 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 SERTM2A0A1B0GWG4 89 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 LOC107986453A0A1B0GWG9 222 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 FAM90A27PA6NNH2 459 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 DEGS1O15121 323 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 MPPED1O15442 326 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 MLNRO43193 412 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 PDE6DO43924 150 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 S1PR2O95136 353 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 NTN1O95631 604 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 MT-CO2P00403 227 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 IGHMP01871 453 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 WNT2P09544 360 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 ASAH2BP0C7U1 165 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 HOXB4P17483 251 aaPredicted RBP4.31□□□□□ -1.72
SSX9-202ENST00000608568 TUBG1P23258 451 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 IL3RAP26951 378 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 ZNF93P35789 620 aaPredicted RBP4.31□□□□□ -1.72
SSX9-202ENST00000608568 PPOXP50336 477 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 SNU13P55769 128 aaKnown RBP4.31□□□□□ -1.72
SSX9-202ENST00000608568 CTXN1P60606 82 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 ERVS71-1P61550 626 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 SEC11AP67812 179 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 ARG2P78540 354 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 HTD2P86397 168 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 PRDX1Q06830 199 aaKnown RBP4.31□□□□□ -1.72
SSX9-202ENST00000608568 OR8B8Q15620 311 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 C5orf64Q2M2E5 130 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 SLC22A6Q4U2R8 563 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 PLAC9Q5JTB6 97 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 CST9LP1Q5W188 147 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 ZNF793Q6ZN11 406 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 Q6ZS46 218 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 C1orf122Q6ZSJ8 110 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 OR10P1Q8NGE3 313 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 OR10W1Q8NGF6 305 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 OR5A1Q8NGJ0 315 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 OR1K1Q8NGR3 316 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 OR2AJ1Q8NGZ0 328 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 ZNF596Q8TC21 504 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 ZNRF4Q8WWF5 429 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 FER1L6-AS2Q96M78 137 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 OR2A5Q96R48 311 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 RAB40CQ96S21 281 aa4.31□□□□□ -1.72
SSX9-202ENST00000608568 TMEM204Q9BSN7 226 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms