RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 PCYT1BQ9Y5K3 369 aaPredicted RBP0.39□□□□□ -2.35
SNORA28-201ENST00000606769 FLG2Q5D862 2391 aaPredicted RBP0.39□□□□□ -2.35
SNORA28-201ENST00000606769 COL6A6A6NMZ7 2263 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 CPAMD8Q8IZJ3 1885 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 NAV1Q8NEY1 1877 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 KIF15Q9NS87 1388 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 TRAV8-1A0A0A6YYK1 113 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 GRIFINA4D1Z8 144 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 GOLGA6L10A6NI86 522 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 TRAPPC2LH3BP13 241 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 CALUO43852 315 aaPredicted RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 ZNF737O75373 536 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 MT-CO2P00403 227 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 IL6P05231 212 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 LYNX1P0DP58 116 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 CFL1P23528 166 aaKnown RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 ALDH3A1P30838 453 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 IFNGR2P38484 337 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 RPL27AP46776 148 aaKnown RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 GABRA2P47869 451 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 HINT1P49773 126 aaPredicted RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 RAP1GDS1P52306 607 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 TMEM33P57088 247 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 CXCR4P61073 352 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 TNFAIP6P98066 277 aaPredicted RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 ANGPT1Q15389 498 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 UAP1Q16222 522 aaPredicted RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 DNAL1Q4LDG9 190 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 FAM201AQ5SY85 155 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 C1orf194Q5T5A4 169 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 CCDC121Q6ZUS5 278 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 SPATA24Q86W54 205 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 LHFPL1Q86WI0 220 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 LRRC28Q86X40 367 aaPredicted RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 ATP6V1C2Q8NEY4 427 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 SGMS2Q8NHU3 365 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 ZNF675Q8TD23 568 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 LRRC45Q96CN5 670 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 SMIM19Q96E16 107 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 ATP6V1G3Q96LB4 118 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 NMNAT3Q96T66 252 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 HSPB9Q9BQS6 159 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 MRPL32Q9BYC8 188 aaKnown RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 EIF5A2Q9GZV4 153 aaKnown RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 HHLA3Q9XRX5 114 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 GMEB1Q9Y692 573 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 KMT2BQ9UMN6 2715 aaPredicted RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 DICER1Q9UPY3 1922 aaKnown RBP0.38□□□□□ -2.35
SNORA28-201ENST00000606769 SIPA1L1O43166 1804 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 MALRD1Q5VYJ5 2156 aa0.38□□□□□ -2.35
SNORA28-201ENST00000606769 KIAA2026Q5HYC2 2103 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 IGHV3-64A0A075B6Q5 118 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 TRAV41A0A0B4J266 112 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 TEX50A0A1B0GTY4 177 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 ERICH2A1L162 156 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 C2orf74A8MZ97 194 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 COX7A2LO14548 114 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 ITGB1BP1O14713 200 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 HPGDSO60760 199 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 CIAO1O76071 339 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 APOMO95445 188 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 NAPSAO96009 420 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 NPYP01303 97 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 TFPTP0C1Z6 253 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 HIST1H1CP16403 213 aaKnown RBP0.37□□□□□ -2.35
SNORA28-201ENST00000606769 UGT2B7P16662 529 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 CD79BP40259 229 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 CCR2P41597 374 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 REG1BP48304 166 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 CD151P48509 253 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 EMP2P54851 167 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 AQP4P55087 323 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 TBPL1P62380 186 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 FKBP1AP62942 108 aaKnown RBP0.37□□□□□ -2.35
SNORA28-201ENST00000606769 SKP1P63208 163 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 HLA-DRB3P79483 266 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 SLC38A11Q08AI6 406 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 TMEM155Q4W5P6 130 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 PABPC1L2AQ5JQF8 200 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 SDHAF4Q5VUM1 108 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 NAA40Q86UY6 237 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 UMODL1-AS1Q8N2C9 162 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 TMEM161BQ8NDZ6 487 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 HAVCR2Q8TDQ0 301 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 RAB2BQ8WUD1 216 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 MS4A6EQ96DS6 147 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 MRPS24Q96EL2 167 aaKnown RBP0.37□□□□□ -2.35
SNORA28-201ENST00000606769 Q96M85 177 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 CCL13Q99616 98 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 MIEN1Q9BRT3 115 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 TMEM109Q9BVC6 243 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 TIPINQ9BVW5 301 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 PLEKHJ1Q9NW61 149 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 CUL9Q8IWT3 2517 aa0.37□□□□□ -2.35
SNORA28-201ENST00000606769 ZFHX2Q9C0A1 2572 aaPredicted RBP0.37□□□□□ -2.35
SNORA28-201ENST00000606769 MED13Q9UHV7 2174 aa0.36□□□□□ -2.35
SNORA28-201ENST00000606769 SCAF11Q99590 1463 aaKnown RBP0.36□□□□□ -2.35
SNORA28-201ENST00000606769 TRGV2A0A075B6R0 118 aa0.36□□□□□ -2.35
SNORA28-201ENST00000606769 SIGLEC16A6NMB1 481 aa0.36□□□□□ -2.35
SNORA28-201ENST00000606769 LST1O00453 97 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms