RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 SMIM13P0DJ93 91 aa8.32□□□□□ -1.08
CSMD1-217ENST00000602723 LOXL3P58215 753 aa8.32□□□□□ -1.08
CSMD1-217ENST00000602723 TCF24Q7RTU0 167 aa8.32□□□□□ -1.08
CSMD1-217ENST00000602723 TMEM183AQ8IXX5 376 aa8.32□□□□□ -1.08
CSMD1-217ENST00000602723 RFLNBQ8N5W9 214 aa8.32□□□□□ -1.08
CSMD1-217ENST00000602723 SMOC1Q9H4F8 434 aa8.32□□□□□ -1.08
CSMD1-217ENST00000602723 TNFSF14O43557 240 aa8.32□□□□□ -1.08
CSMD1-217ENST00000602723 TRIP6Q15654 476 aaKnown RBP8.32□□□□□ -1.08
CSMD1-217ENST00000602723 C7orf71A4D174 169 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 PRDX2P32119 198 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 ZNF506Q5JVG8 444 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 GGACTQ9BVM4 153 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 IL4P05112 153 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 NXPH1P58417 271 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 CEACAM21Q3KPI0 293 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 MBNL2Q5VZF2 373 aaKnown RBP8.31□□□□□ -1.08
CSMD1-217ENST00000602723 HCP5Q6MZN7 132 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 OR4C13Q8NGP0 309 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 SFRP2Q96HF1 295 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 SH3BGRL3Q9H299 93 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 FOXJ2Q9P0K8 574 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 PPP1R17O96001 155 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 FXYD3Q14802 87 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 GALNT14Q96FL9 552 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 CACNA1AO00555 2505 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 A0A1W2PPC1 479 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 GLIPR1P48060 266 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 OR4D5Q8NGN0 318 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 MRAP2Q96G30 205 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 ZNF414Q96IQ9 312 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 KLK15Q9H2R5 256 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 NUP37Q8NFH4 326 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 A0A0B4J293 547 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 GRIFINA4D1Z8 144 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 STAG3L3P0CL85 134 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 ARF6P62330 175 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 LIMS2Q7Z4I7 341 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 SHANK3Q9BYB0 1731 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 TRBV23-1A0A0A0MS06 115 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 BHLHA9Q7RTU4 235 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 ZAR1Q86SH2 424 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 DEFB124Q8NES8 71 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 DRD3P35462 400 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 CDX1P47902 265 aaPredicted RBP8.31□□□□□ -1.08
CSMD1-217ENST00000602723 PPP1R3EQ9H7J1 279 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 GEMIN7Q9H840 131 aaKnown RBP8.31□□□□□ -1.08
CSMD1-217ENST00000602723 WNT16Q9UBV4 365 aa8.31□□□□□ -1.08
CSMD1-217ENST00000602723 SPEM2Q0P670 501 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 ZNF418Q8TF45 676 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-217ENST00000602723 AQP3Q92482 292 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 SOX21Q9Y651 276 aaPredicted RBP8.3□□□□□ -1.08
CSMD1-217ENST00000602723 CD1AP06126 327 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 ANOS1P23352 680 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 C10orf111Q8N326 155 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 FADS6Q8N9I5 356 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 IGHV1OR15-9A0A0B4J2B8 117 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 C21orf140B9A014 251 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 SLC25A17O43808 307 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 TAF15Q92804 592 aaKnown RBP eCLIP8.3□□□□□ -1.08
CSMD1-217ENST00000602723 AQP10Q96PS8 301 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 PEF1Q9UBV8 284 aaKnown RBP8.3□□□□□ -1.08
CSMD1-217ENST00000602723 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 C1orf174Q8IYL3 243 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 PRSS27Q9BQR3 290 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 ZNF488Q96MN9 340 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 WDR54Q9H977 334 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 PLXNB3Q9ULL4 1909 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 RPS11P62280 158 aaKnown RBP eCLIP8.3□□□□□ -1.08
CSMD1-217ENST00000602723 APOBEC4Q8WW27 367 aaKnown RBP8.3□□□□□ -1.08
CSMD1-217ENST00000602723 TLNRD1Q9H1K6 362 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 TMEM131Q92545 1883 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 WNT9BO14905 357 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 RPL27AP46776 148 aaKnown RBP8.3□□□□□ -1.08
CSMD1-217ENST00000602723 CCL27Q9Y4X3 112 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 C16orf97H3BN30 126 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 SSTR5P35346 364 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 PSG9Q00887 426 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 WNT2BQ93097 391 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 A0A1W2PS18 150 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 MARCH11A6NNE9 402 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 S1PR2O95136 353 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 FAM106CPP0CH98 169 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 RTN4RQ9BZR6 473 aa8.3□□□□□ -1.08
CSMD1-217ENST00000602723 IFITM3Q01628 133 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 REC114Q7Z4M0 266 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 STPG3Q8N7X2 389 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 MARS2Q96GW9 593 aaKnown RBP8.29□□□□□ -1.08
CSMD1-217ENST00000602723 FAM27BQ5VT28 67 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 PRR7Q8TB68 274 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 SIRT4Q9Y6E7 314 aaPredicted RBP8.29□□□□□ -1.08
CSMD1-217ENST00000602723 CBLN1P23435 193 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 SGK494Q96LW2 274 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 KIR2DL4Q99706 377 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 MRPS18AQ9NVS2 196 aaKnown RBP8.29□□□□□ -1.08
CSMD1-217ENST00000602723 FAM181BA6NEQ2 426 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 C9orf172C9J069 976 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 SCTP09683 121 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 DANCRP0C864 163 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 FGF12P61328 243 aa8.29□□□□□ -1.08
CSMD1-217ENST00000602723 TNFRSF9Q07011 255 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms