RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 FOXRED2Q8IWF2 684 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 MRPL41Q8IXM3 137 aaKnown RBP4.14□□□□□ -1.75
VRK3-226ENST00000602029 OSR2Q8N2R0 312 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 BVESQ8NE79 360 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 WFDC9Q8NEX5 89 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 Q8NFD4 153 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 OR11H6Q8NGC7 330 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 OR51A2Q8NGJ7 313 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 LHFPL5Q8TAF8 219 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 ST8SIA2Q92186 375 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 FGGYQ96C11 551 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 RAB3CQ96E17 227 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 AJUBAQ96IF1 538 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 NOL4LQ96MY1 436 aaPredicted RBP4.14□□□□□ -1.75
VRK3-226ENST00000602029 S100A13Q99584 98 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 ARPC5LQ9BPX5 153 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 NRIP2Q9BQI9 281 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 PDCD10Q9BUL8 212 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 CHST5Q9GZS9 411 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 FXYD6Q9H0Q3 95 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 LPAR5Q9H1C0 372 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 LINC00527Q9UJ94 153 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 MOB4Q9Y3A3 225 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 AMMECR1Q9Y4X0 333 aaPredicted RBP4.14□□□□□ -1.75
VRK3-226ENST00000602029 LINC00312Q9Y6C7 94 aa4.14□□□□□ -1.75
VRK3-226ENST00000602029 TEX13DA0A0J9YY54 714 aaPredicted RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 PQLC2LA1A4F0 135 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 TMEM235A6NFC5 223 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 FOXI3A8MTJ6 420 aaPredicted RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 SEC14L6B5MCN3 397 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 F8VVB4 439 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 F8VWA3 439 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 C3orf84H3BNL1 204 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 SH2D1BO14796 132 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 MGST3O14880 152 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 RAMP3O60896 148 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 SNRNP70P08621 437 aaKnown RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 HCKP08631 526 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 TPT1P13693 172 aaKnown RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 PSMB6P28072 239 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 HRH1P35367 487 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 MYCNOSP40205 109 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 PTGFRP43088 359 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 DYNLT3P51808 116 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 ATP1B3P54709 279 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 IL24Q13007 206 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 KISS1Q15726 138 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 DEFB136Q30KP8 78 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 SCGB2B2Q4G0G5 96 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 TCTEX1D4Q5JR98 221 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 CXorf66Q5JRM2 361 aaPredicted RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 TPTE2P1Q5T6R2 138 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 ZNF660Q6AZW8 331 aaPredicted RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 FAAP20Q6NZ36 180 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 Q6ZS49 121 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 LHFPL2Q6ZUX7 228 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 SLC35E3Q7Z769 313 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 RTN4RL2Q86UN3 420 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 ZNF695Q8IW36 515 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 Q8IYB0 196 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 FAM58AQ8N1B3 248 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 C11orf42Q8N5U0 333 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 LINC00482Q8N8I6 264 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 PXT1Q8NFP0 134 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR5AP2Q8NGF4 316 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR52N4Q8NGI2 321 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR4D10Q8NGI6 311 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR52B4Q8NGK2 314 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR13C9Q8NGT0 318 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR5H2Q8NGV7 314 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR10X1Q8NGY0 326 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR14K1Q8NGZ2 314 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR4K15Q8NH41 348 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 OR1S1Q8NH92 325 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 PPP1R1CQ8WVI7 109 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 ADAT3Q96EY9 351 aaPredicted RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 SAT2Q96F10 170 aaPredicted RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 SNX22Q96L94 193 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 RBM14Q96PK6 669 aaKnown RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 AQP10Q96PS8 301 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 PKIBQ9C010 78 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 TINAGL1Q9GZM7 467 aaPredicted RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 RHOFQ9HBH0 211 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 CHMP1AQ9HD42 196 aaPredicted RBP4.13□□□□□ -1.75
VRK3-226ENST00000602029 IL36RNQ9UBH0 155 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 GPR132Q9UNW8 380 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
VRK3-226ENST00000602029 TRAV14DV4A0A0A6YYC5 116 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 MPTX1A8MV57 137 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 CCL24O00175 119 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 FGF16O43320 207 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 MMP23AO75900 390 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 SFT2D2O95562 160 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 CFDP00746 253 aaPredicted RBP4.12□□□□□ -1.75
VRK3-226ENST00000602029 GAPDHP04406 335 aaKnown RBP4.12□□□□□ -1.75
VRK3-226ENST00000602029 BCL3P20749 454 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 THBS3P49746 956 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 RBP2P50120 134 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 FUT6P51993 359 aa4.12□□□□□ -1.75
VRK3-226ENST00000602029 DLX6P56179 175 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms