RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 C17orf58Q2M2W7 97 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 IAH1Q2TAA2 248 aaPredicted RBP8.2□□□□□ -1.1
UPF1-213ENST00000601981 TMEM268Q5VZI3 342 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 BRD3OSQ6XYD6 125 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 C9orf139Q6ZV77 190 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 ZNF695Q8IW36 515 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 PDZD9Q8IXQ8 264 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 ABHD12Q8N2K0 398 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 C11orf42Q8N5U0 333 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 DRAM1Q8N682 238 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 RFESDQ8TAC1 157 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 LHFPL5Q8TAF8 219 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 THAP6Q8TBB0 222 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 TNFRSF14Q92956 283 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 YPEL2Q96QA6 119 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 SPIN2AQ99865 258 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 SPIN2BQ9BPZ2 258 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 GNG12Q9UBI6 72 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 TNFSF18Q9UNG2 199 aa8.2□□□□□ -1.1
UPF1-213ENST00000601981 TBL2Q9Y4P3 447 aaKnown RBP8.2□□□□□ -1.1
UPF1-213ENST00000601981 AMMECR1Q9Y4X0 333 aaPredicted RBP8.2□□□□□ -1.1
UPF1-213ENST00000601981 A0A087X0M5 115 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 A0A1B0GX30 115 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 TNFSF12O43508 249 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 OR2F2O95006 317 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 IL3RAP26951 378 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 S100A11P31949 105 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 CEACAM3P40198 252 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 LOXL3P58215 753 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 EIF4EBP1Q13541 118 aaPredicted RBP8.19□□□□□ -1.1
UPF1-213ENST00000601981 OR2F1Q13607 317 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 LTC4SQ16873 150 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 Q3ZCU0 254 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 LRRC37A5PQ49AS3 106 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 RUSC1-AS1Q66K80 236 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 PRSS54Q6PEW0 395 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 LYZL2Q7Z4W2 148 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 ZNF546Q86UE3 836 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 SELENOHQ8IZQ5 122 aaKnown RBP8.19□□□□□ -1.1
UPF1-213ENST00000601981 TCTEX1D1Q8N7M0 179 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 SLC35G3Q8N808 338 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 OR11H6Q8NGC7 330 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 OR9G1Q8NH87 305 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 RBPMSQ93062 196 aaKnown RBP8.19□□□□□ -1.1
UPF1-213ENST00000601981 ZDHHC16Q969W1 377 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 OR2D2Q9H210 308 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 FAM212BQ9NTI7 297 aaPredicted RBP8.19□□□□□ -1.1
UPF1-213ENST00000601981 ZFP57Q9NU63 452 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 GFOD1Q9NXC2 390 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 MBD2Q9UBB5 411 aa8.19□□□□□ -1.1
UPF1-213ENST00000601981 IGHV3-43A0A0B4J1X8 118 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 A0A0D9SG52 128 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 A0A1W2PRD5 423 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 A0A1W2PRF3 423 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 A0A1W2PRM7 423 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 BTBD17A6NE02 478 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 TCF21O43680 179 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 MMP23AO75900 390 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 SERPINE2P07093 398 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 IGHV3-43DP0DP04 118 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 HTR1DP28221 377 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 SAA4P35542 130 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 RAB7AP51149 207 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 CATR1Q13166 79 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 OPCMLQ14982 345 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 MORN2Q502X0 79 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 MINOS1Q5TGZ0 78 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 ZNF66Q6ZN08 573 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 ACOT7LQ6ZUV0 252 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 TMUB2Q71RG4 321 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 ZNF767PQ75MW2 155 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 KCNRGQ8N5I3 272 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 BEND2Q8NDZ0 799 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 OR51H1Q8NH63 302 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 C22orf15Q8WYQ4 148 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 C5orf30Q96GV9 206 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 ABHD14BQ96IU4 210 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 MFFQ9GZY8 342 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 GSKIPQ9P0R6 139 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 MINOS1-NBL1R4GNA1 71 aa8.18□□□□□ -1.1
UPF1-213ENST00000601981 MXRA5Q9NR99 2828 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 ANK3Q12955 4377 aaKnown RBP8.17□□□□□ -1.1
UPF1-213ENST00000601981 RNF222A6NCQ9 220 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 ODF3BA8MYP8 253 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 LEUTXA8MZ59 168 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 H0YIZ8 118 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 TSC22D2O75157 780 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 SLC25A6P12236 298 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 VDAC1P21796 283 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 GNG10P50151 68 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 DLX1P56177 255 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 PRB3Q04118 309 aaPredicted RBP8.17□□□□□ -1.1
UPF1-213ENST00000601981 RAB32Q13637 225 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 SMCO1Q147U7 214 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 HLA-DRB5Q30154 266 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 NMSQ5H8A3 153 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 HCP5Q6MZN7 132 aa8.17□□□□□ -1.1
UPF1-213ENST00000601981 FAM53AQ6NSI3 398 aaPredicted RBP8.17□□□□□ -1.1
UPF1-213ENST00000601981 CCDC144NLQ6NUI1 221 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms