RNA–Protein interactions for RNA: ENST00000600840.1

TRIM28-214, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-214ENST00000600840 CHST1O43916 411 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 RAB3DO95716 219 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 GIPP09681 153 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 SAA2P0DJI9 122 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 CT45A6P0DMU7 189 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 CT45A5P0DMU8 189 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 CT45A7P0DMV0 189 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 GNRHRP30968 328 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 OR3A3P47888 321 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 RAB13P51153 203 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 NKX2-5P52952 324 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 UCP3P55916 312 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 BRWD1-AS2P59051 145 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 LINC00205P59089 165 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 ARPC4P59998 168 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF816Q0VGE8 651 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 EBI3Q14213 229 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 MSMO1Q15800 293 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 ACTBL2Q562R1 376 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 RNASE10Q5GAN6 216 aaKnown RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 C11orf87Q6NUJ2 197 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 FAAP20Q6NZ36 180 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 GLDNQ6ZMI3 551 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 ARRDC1Q8N5I2 433 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 C11orf44Q8N8P7 122 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 TERB2Q8NHR7 220 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 MRAPQ8TCY5 172 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF431Q8TF32 576 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 RTN4IP1Q8WWV3 396 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 EDARADDQ8WWZ3 215 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 ABHD14BQ96IU4 210 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF2Q9BSG1 426 aaPredicted RBP6.99□□□□□ -1.29
TRIM28-214ENST00000600840 KRTAP17-1Q9BYP8 105 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 EHFQ9NZC4 300 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 RNF150Q9ULK6 438 aa6.99□□□□□ -1.29
TRIM28-214ENST00000600840 PLXNB1O43157 2135 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 TRAV6A0A075B6T7 132 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 LEUTXA8MZ59 168 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 OOSP1A8MZH6 123 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 RAB29O14966 203 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 HSPA12AO43301 675 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 RAB7AP51149 207 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 DYNLT3P51808 116 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 FCN2Q15485 313 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 AANATQ16613 207 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 RPL39P5Q59GN2 51 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 FAM71F2Q6NXP2 309 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 LPCAT3Q6P1A2 487 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 Q6ZS46 218 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 LYG1Q8N1E2 194 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 DRAM1Q8N682 238 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.98□□□□□ -1.29
TRIM28-214ENST00000600840 OR2AK2Q8NG84 335 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 DDB2Q92466 427 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 RBMXL1Q96E39 390 aaKnown RBP6.98□□□□□ -1.29
TRIM28-214ENST00000600840 NABP2Q9BQ15 211 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 GINS4Q9BRT9 223 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 RSRP1Q9BUV0 290 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF436Q9C0F3 470 aaPredicted RBP6.98□□□□□ -1.29
TRIM28-214ENST00000600840 FXYD6Q9H0Q3 95 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 CCL28Q9NRJ3 127 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 SDHAF2Q9NX18 166 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 GPR132Q9UNW8 380 aa6.98□□□□□ -1.29
TRIM28-214ENST00000600840 IGHV1-3A0A0C4DH29 117 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 BTBD17A6NE02 478 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 LINC00473A8K010 186 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 DISC1C4P0D8 188 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 IFNA7P01567 189 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 GAPDHP04406 335 aaKnown RBP6.97□□□□□ -1.29
TRIM28-214ENST00000600840 LUMP51884 338 aaPredicted RBP6.97□□□□□ -1.29
TRIM28-214ENST00000600840 RPL30P62888 115 aaKnown RBP6.97□□□□□ -1.29
TRIM28-214ENST00000600840 DHODHQ02127 395 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 SSX2Q16385 188 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 LRRC75BQ2VPJ9 315 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 KPRPQ5T749 579 aaPredicted RBP6.97□□□□□ -1.29
TRIM28-214ENST00000600840 SAMD5Q5TGI4 173 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF818PQ6ZRF7 136 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 THNSL2Q86YJ6 484 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 Q8N6K4 173 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 ZNF383Q8NA42 475 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 BVESQ8NE79 360 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 OR5AN1Q8NGI8 311 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 OR51S1Q8NGJ8 323 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 OR5R1Q8NH85 324 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 PRRT1Q99946 306 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 RTBDNQ9BSG5 229 aaPredicted RBP6.97□□□□□ -1.29
TRIM28-214ENST00000600840 PIPOXQ9P0Z9 390 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 HSPB11Q9Y547 144 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 HILPDAQ9Y5L2 63 aa6.97□□□□□ -1.29
TRIM28-214ENST00000600840 HSD17B6O14756 317 aa6.96□□□□□ -1.3
TRIM28-214ENST00000600840 ARPC1BO15143 372 aaKnown RBP6.96□□□□□ -1.3
TRIM28-214ENST00000600840 OR2A4O95047 310 aa6.96□□□□□ -1.3
TRIM28-214ENST00000600840 AMY2AP04746 511 aa6.96□□□□□ -1.3
TRIM28-214ENST00000600840 DUTP33316 252 aaKnown RBP6.96□□□□□ -1.3
TRIM28-214ENST00000600840 CEACAM3P40198 252 aa6.96□□□□□ -1.3
TRIM28-214ENST00000600840 REG1BP48304 166 aa6.96□□□□□ -1.3
TRIM28-214ENST00000600840 CCR6P51684 374 aa6.96□□□□□ -1.3
TRIM28-214ENST00000600840 LGALS4P56470 323 aa6.96□□□□□ -1.3
TRIM28-214ENST00000600840 UBE2MP61081 183 aaKnown RBP6.96□□□□□ -1.3
TRIM28-214ENST00000600840 FGL1Q08830 312 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms