RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TNFRSF9Q07011 255 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 PRSS8Q16651 343 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 KLK9Q2XQG4 91 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 ACSM3Q53FZ2 586 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 CEMP1Q6PRD7 247 aaPredicted RBP4.56□□□□□ -1.68
VRK3-220ENST00000600259 GPHB5Q86YW7 130 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 TTC9CQ8N5M4 171 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 NANOGP1Q8N7R0 232 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 TEX45Q8NA69 505 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 SETD9Q8NE22 299 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 SETD6Q8TBK2 473 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 PHYHIPQ92561 330 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 TMEM59Q9BXS4 323 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 S100A14Q9HCY8 104 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 PLEKHJ1Q9NW61 149 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 SLC2A8Q9NY64 477 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 RDH8Q9NYR8 311 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 TECRQ9NZ01 308 aaKnown RBP4.56□□□□□ -1.68
VRK3-220ENST00000600259 PEMTQ9UBM1 199 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 ZNF221Q9UK13 617 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 KLK9Q9UKQ9 250 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 HSF4Q9ULV5 492 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 KCNK7Q9Y2U2 307 aa4.56□□□□□ -1.68
VRK3-220ENST00000600259 DNAH17Q9UFH2 4485 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 A0A1B0GW64 132 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 TMEM213A2RRL7 107 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 FAM223BA6NKX1 122 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 LINC00473A8K010 186 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 TRDCB7Z8K6 153 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 PPP5D1E7EU14 171 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 E7EUB6 86 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 OR2C1O95371 312 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 BPNT1O95861 308 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 HLA-AP01891 365 aaKnown RBP4.55□□□□□ -1.68
VRK3-220ENST00000600259 APOA2P02652 100 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 ATF4P18848 351 aaPredicted RBP4.55□□□□□ -1.68
VRK3-220ENST00000600259 SRMP19623 302 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 CBLN1P23435 193 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 TAS2R43P59537 309 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 UBE2KP61086 200 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 ATP5G2Q06055 141 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 EXOSC2Q13868 293 aaKnown RBP4.55□□□□□ -1.68
VRK3-220ENST00000600259 PLAC9Q5JTB6 97 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 GLT8D1Q68CQ7 371 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 FAM223AQ8IWN6 122 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 TMEM61Q8N0U2 210 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 PQLC1Q8N2U9 271 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 FBLIM1Q8WUP2 373 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 SRSF12Q8WXF0 261 aaKnown RBP4.55□□□□□ -1.68
VRK3-220ENST00000600259 CACNG8Q8WXS5 425 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 ARHGAP5-AS1Q96IT6 56 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 HARBI1Q96MB7 349 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 FANCD2OSQ96PS1 177 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 PECRQ9BY49 303 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 CHMP1AQ9HD42 196 aaPredicted RBP4.55□□□□□ -1.68
VRK3-220ENST00000600259 PLCXD1Q9NUJ7 323 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 FKBP14Q9NWM8 211 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 COA4Q9NYJ1 87 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 MLXQ9UH92 298 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 PSORS1C1Q9UIG5 152 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 MGAT4AQ9UM21 535 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 SELENOKQ9Y6D0 94 aa4.55□□□□□ -1.68
VRK3-220ENST00000600259 PCLOQ9Y6V0 5065 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 LOC102724200A0A096LPH7 203 aaPredicted RBP4.54□□□□□ -1.68
VRK3-220ENST00000600259 TRBV6-7A0A0A0MS04 114 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 A0A0B4J203 849 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 A0A0J9YWU9 116 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 ERICH4A6NGS2 130 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 TEX22C9J3V5 150 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 SHOXO15266 292 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 GGCTO75223 188 aaKnown RBP4.54□□□□□ -1.68
VRK3-220ENST00000600259 DEDDO75618 318 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 OR2J3O76001 311 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 NDUFB8O95169 186 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 IL6RP08887 468 aaPredicted RBP4.54□□□□□ -1.68
VRK3-220ENST00000600259 UCHL1P09936 223 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 GSTT2P0CG29 244 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 GSTT2BP0CG30 244 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 C8orf88P0DMB2 117 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 MAPK3P27361 379 aaPredicted RBP4.54□□□□□ -1.68
VRK3-220ENST00000600259 DUTP33316 252 aaKnown RBP4.54□□□□□ -1.68
VRK3-220ENST00000600259 WNT4P56705 351 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 BRWD1-AS2P59051 145 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 TAGLNQ01995 201 aaKnown RBP4.54□□□□□ -1.68
VRK3-220ENST00000600259 PLA2G7Q13093 441 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 PMS2P11Q13670 270 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 GUCA2BQ16661 112 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 IGSF11Q5DX21 431 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 C10orf55Q5SWW7 151 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 TMEM91Q6ZNR0 172 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 IDO2Q6ZQW0 420 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 C19orf35Q6ZS72 473 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 MS4A15Q8N5U1 240 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 UXS1Q8NBZ7 420 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 NECAP1Q8NC96 275 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 ZNF555Q8NEP9 628 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 OR4A4PQ8NGN8 299 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 CYGBQ8WWM9 190 aa4.54□□□□□ -1.68
VRK3-220ENST00000600259 THRSPQ92748 146 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms