RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 CHST1O43916 411 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 RAMP3O60896 148 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 FCGR3BO75015 233 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 OR2F2O95006 317 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 RNASE1P07998 156 aaKnown RBP10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 VSIG10L2P0DP72 767 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 TMEM11P17152 192 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 UBA52P62987 128 aaKnown RBP10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 DHODHQ02127 395 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 HES1Q14469 280 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 HNF4GQ14541 408 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 ZNF585BQ52M93 769 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 OR2B11Q5JQS5 317 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 LIAT1Q6ZQX7 453 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 NRARPQ7Z6K4 114 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 SLC25A42Q86VD7 318 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 SPAG16Q8N0X2 631 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 OR8H1Q8NGG4 311 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 OR4C13Q8NGP0 309 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 OR4S2Q8NH73 311 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 CD300LFQ8TDQ1 290 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 FLYWCH2Q96CP2 140 aaKnown RBP10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 RBM14Q96PK6 669 aaKnown RBP10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 DUX5Q96PT3 197 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 NAA60Q9H7X0 242 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 LIN7CQ9NUP9 197 aaKnown RBP10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 PITPNC1Q9UKF7 332 aa10.1□□□□□ -0.79
CHMP2A-206ENST00000600118 NIPBLQ6KC79 2804 aaeCLIP10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 SRRM4A7MD48 611 aaKnown RBP10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 B3GALNT1O75752 331 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 CRYZL1O95825 349 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 MECP2P51608 486 aaKnown RBP10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 SUPT4H1P63272 117 aaKnown RBP10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 C16orf82Q7Z2V1 217 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 TMED4Q7Z7H5 227 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 TMEM219Q86XT9 240 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 CENPSQ8N2Z9 138 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 NPBQ8NG41 125 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 OSR1Q8TAX0 266 aaPredicted RBP10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 ENKURQ8TC29 256 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 GALNT14Q96FL9 552 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 TP53RKQ96S44 253 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 SLC25A33Q9BSK2 321 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 C20orf85Q9H1P6 137 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 TNFRSF19Q9NS68 423 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 NUBP2Q9Y5Y2 271 aa10.09□□□□□ -0.79
CHMP2A-206ENST00000600118 NF1P21359 2839 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 TEX13DA0A0J9YY54 714 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 C3orf85A0A1B0GTC6 90 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 ARPC1BO15143 372 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 GPR137BO60478 399 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 NDUFA3O95167 84 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 HPRT1P00492 218 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 IGLV2-23P01705 113 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 AMY1AP04745 511 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 UCP1P25874 307 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 CNTFRP26992 372 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 LGALS7P47929 136 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 F2RL1P55085 397 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 TAS2R31P59538 309 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 UBE2MP61081 183 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 RPS16P62249 146 aaKnown RBP10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 CBX3Q13185 183 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 TMEM128Q5BJH2 165 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 SGPP2Q8IWX5 399 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 ALX4Q9H161 411 aaPredicted RBP10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 PLEKHA2Q9HB19 425 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 NUDT15Q9NV35 164 aa10.08□□□□□ -0.8
CHMP2A-206ENST00000600118 SHOXO15266 292 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 NBR2O15453 112 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 S1PR2O95136 353 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 SPDEFO95238 335 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 PTTG1O95997 202 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 IFNA2P01563 188 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 IGKV1-39P01597 117 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 IGKV1D-39P04432 117 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 CRYGBP07316 175 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 H2AFB2P0C5Z0 115 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 OR5AC1P0C628 307 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 AKR1C4P17516 323 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 ANXA7P20073 488 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 LPAR6P43657 344 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 PPP1R1AQ13522 171 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 PSG5Q15238 335 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 MMDQ15546 238 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 POU2AF1Q16633 256 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 SP6Q3SY56 376 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 FAM71E2Q8N5Q1 922 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 C5orf56Q8N8D9 126 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 Q8N9W7 124 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 GLYATL2Q8WU03 294 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 HARBI1Q96MB7 349 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 TSNAXQ99598 290 aaKnown RBP10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 TMEM222Q9H0R3 208 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 RAB18Q9NP72 206 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 C1RLQ9NZP8 487 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 COMMD9Q9P000 198 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 MOB4Q9Y3A3 225 aa10.07□□□□□ -0.8
CHMP2A-206ENST00000600118 JMJD1CQ15652 2540 aa10.06□□□□□ -0.8
CHMP2A-206ENST00000600118 CUBNO60494 3623 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 211.6 ms