RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 RNF167Q9H6Y7 350 aa13.01□□□□□ -0.33
PNKP-210ENST00000597965 PEMTQ9UBM1 199 aa13.01□□□□□ -0.33
PNKP-210ENST00000597965 PEF1Q9UBV8 284 aaKnown RBP13.01□□□□□ -0.33
PNKP-210ENST00000597965 AK3Q9UIJ7 227 aa13.01□□□□□ -0.33
PNKP-210ENST00000597965 LOC100506127A0A0U1RQW1 187 aa13□□□□□ -0.33
PNKP-210ENST00000597965 JTBO76095 146 aa13□□□□□ -0.33
PNKP-210ENST00000597965 MRPS15P82914 257 aaKnown RBP13□□□□□ -0.33
PNKP-210ENST00000597965 LRRTM1Q86UE6 522 aa13□□□□□ -0.33
PNKP-210ENST00000597965 HAPLN4Q86UW8 402 aa13□□□□□ -0.33
PNKP-210ENST00000597965 ZNF383Q8NA42 475 aa13□□□□□ -0.33
PNKP-210ENST00000597965 OR5T1Q8NG75 326 aa13□□□□□ -0.33
PNKP-210ENST00000597965 OR2K2Q8NGT1 345 aa13□□□□□ -0.33
PNKP-210ENST00000597965 TMED9Q9BVK6 235 aa13□□□□□ -0.33
PNKP-210ENST00000597965 DCSTAMPQ9H295 470 aa13□□□□□ -0.33
PNKP-210ENST00000597965 Q9N2K0 584 aa13□□□□□ -0.33
PNKP-210ENST00000597965 SLC35D1Q9NTN3 355 aa13□□□□□ -0.33
PNKP-210ENST00000597965 OR1A1Q9P1Q5 309 aa13□□□□□ -0.33
PNKP-210ENST00000597965 A0A0B4J203 849 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 ANKRD34BA5PLL1 514 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 OR2A4O95047 310 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 SYNJ2BPP57105 145 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 RPS25P62851 125 aaKnown RBP12.99□□□□□ -0.33
PNKP-210ENST00000597965 QRFPP83859 136 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 HAGHQ16775 308 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 RPEL1Q2QD12 228 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 CEACAM19Q7Z692 300 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 FAM89BQ8N5H3 189 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 SNAPC3Q92966 411 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 TINAGL1Q9GZM7 467 aaPredicted RBP12.99□□□□□ -0.33
PNKP-210ENST00000597965 PARP12Q9H0J9 701 aaKnown RBP12.99□□□□□ -0.33
PNKP-210ENST00000597965 LPAR5Q9H1C0 372 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 PLGRKTQ9HBL7 147 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 SSR3Q9UNL2 185 aa12.99□□□□□ -0.33
PNKP-210ENST00000597965 TRDV1A0A1B0GX56 115 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 TRDCB7Z8K6 153 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 M0R1X1 148 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 SCTP09683 121 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 RRASP10301 218 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 CD37P11049 281 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 RTL8BQ17RB0 113 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 FAM209BQ5JX69 171 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 ZNF343Q6P1L6 599 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 LAX1Q8IWV1 398 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 CYYR1Q96J86 154 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 PHB2Q99623 299 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 CMSS1Q9BQ75 279 aaKnown RBP12.98□□□□□ -0.33
PNKP-210ENST00000597965 RDH8Q9NYR8 311 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 TNCP24821 2201 aa12.98□□□□□ -0.33
PNKP-210ENST00000597965 SACSQ9NZJ4 4579 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 SHISA3A0PJX4 238 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 SOCS1O15524 211 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 ARL6IP5O75915 188 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 DIRAS3O95661 229 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 FABP5Q01469 135 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 INSL4Q14641 139 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 OR56B1Q8NGI3 324 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 OR4A4PQ8NGN8 299 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 TMEM203Q969S6 136 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 HARBI1Q96MB7 349 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 SLIRPQ9GZT3 109 aaKnown RBP12.97□□□□□ -0.33
PNKP-210ENST00000597965 TXNL4BQ9NX01 149 aaKnown RBP12.97□□□□□ -0.33
PNKP-210ENST00000597965 COA4Q9NYJ1 87 aa12.97□□□□□ -0.33
PNKP-210ENST00000597965 SLC17A2O00624 439 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 SHOXO15266 292 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 CREBL2O60519 120 aaPredicted RBP12.96□□□□□ -0.33
PNKP-210ENST00000597965 PROP1O75360 226 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 UCHL1P09936 223 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 GALP22466 123 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 FGF9P31371 208 aaPredicted RBP12.96□□□□□ -0.33
PNKP-210ENST00000597965 TRAM1Q15629 374 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 IL34Q6ZMJ4 242 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 LINC00299Q6ZSB3 139 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 BVESQ8NE79 360 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 OR10J5Q8NHC4 309 aa12.96□□□□□ -0.33
PNKP-210ENST00000597965 HDHD3Q9BSH5 251 aaPredicted RBP12.96□□□□□ -0.33
PNKP-210ENST00000597965 NXF2Q9GZY0 626 aaKnown RBP12.96□□□□□ -0.33
PNKP-210ENST00000597965 CCDC59Q9P031 241 aaKnown RBP12.96□□□□□ -0.33
PNKP-210ENST00000597965 A0A0A6YYD4 124 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 IGLV2-23P01705 113 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 CSN3P07498 182 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 PSMD7P51665 324 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 RAB11BQ15907 218 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 VMA21Q3ZAQ7 101 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 TMEM91Q6ZNR0 172 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 ARHGAP5-AS1Q96IT6 56 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 ADTRPQ96IZ2 230 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 GAR1Q9NY12 217 aaKnown RBP12.95□□□□□ -0.34
PNKP-210ENST00000597965 SLC2A8Q9NY64 477 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 RYR2Q92736 4967 aa12.95□□□□□ -0.34
PNKP-210ENST00000597965 FAM223BA6NKX1 122 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 MPPED1O15442 326 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 TPPPO94811 219 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 CRYGBP07316 175 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 RPS19P39019 145 aaKnown RBP12.94□□□□□ -0.34
PNKP-210ENST00000597965 P2RY14Q15391 338 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 TMEM177Q53S58 311 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 C22orf42Q6IC83 251 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 FAM223AQ8IWN6 122 aa12.94□□□□□ -0.34
PNKP-210ENST00000597965 THAP7Q9BT49 309 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms