RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ATG5Q9H1Y0 275 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 A3GALT2U3KPV4 340 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 FAT2Q9NYQ8 4349 aa10.44□□□□□ -0.74
SHKBP1-208ENST00000595726 DNAH2Q9P225 4427 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 FABP7O15540 132 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 TNFAIP8O95379 198 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 CLEC2LP0C7M8 214 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 SNRPBP14678 240 aaKnown RBP10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 ACTBP60709 375 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 NDPQ00604 133 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 MXD1Q05195 221 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 C19orf54Q5BKX5 351 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 OR4A4PQ8NGN8 299 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 LGALS14Q8TCE9 139 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 MAFIPQ8WZ33 124 aa10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 C11orf54Q9H0W9 315 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 ELF5Q9UKW6 265 aaPredicted RBP10.43□□□□□ -0.74
SHKBP1-208ENST00000595726 H0Y980 276 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 HLA-DRB1P01911 266 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 CT45A6P0DMU7 189 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 CT45A5P0DMU8 189 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 CT45A7P0DMV0 189 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 EWSR1Q01844 656 aaKnown RBP eCLIP10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 IGSF11Q5DX21 431 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 FAM131AQ6UXB0 335 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 TSPAN14Q8NG11 270 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 RDH8Q9NYR8 311 aa10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 ZNF230Q9UIE0 474 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 FOXA2Q9Y261 457 aaPredicted RBP10.42□□□□□ -0.74
SHKBP1-208ENST00000595726 A0A087WXM4 84 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 OR5H14A6NHG9 310 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 H0YJW9 148 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 BET1O15155 118 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 NBR2O15453 112 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 PROP1O75360 226 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 NDUFA3O95167 84 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 DIRAS3O95661 229 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 GSTT2P0CG29 244 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 GSTT2BP0CG30 244 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 SERPINB10P48595 397 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 ARFRP1Q13795 201 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 ARL6IP1Q15041 203 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 LIN54Q6MZP7 749 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 GLDNQ6ZMI3 551 aaPredicted RBP10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 Q6ZS49 121 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 DEFB125Q8N687 156 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 RHOVQ96L33 236 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 WFDC10AQ9H1F0 79 aa10.41□□□□□ -0.74
SHKBP1-208ENST00000595726 IGKV1D-8A0A087WSZ0 117 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 TRBV6-7A0A0A0MS04 114 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 SCGNO76038 276 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 EGR2P11161 476 aaPredicted RBP10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 DTYMKP23919 212 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 TGFBR1P36897 503 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 SCAND1P57086 179 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 C5orf64Q2M2E5 130 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 TIMM50Q3ZCQ8 353 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 CDNFQ49AH0 187 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 CEMP1Q6PRD7 247 aaPredicted RBP10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 NPBQ8NG41 125 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 OR5AN1Q8NGI8 311 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 OR5H6Q8NGV6 325 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 SLC25A38Q96DW6 304 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 YIPF6Q96EC8 236 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 VCX3AQ9NNX9 186 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 RHBDL2Q9NX52 303 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 ADAM30Q9UKF2 790 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 RNF150Q9ULK6 438 aa10.4□□□□□ -0.74
SHKBP1-208ENST00000595726 ANKRD34BA5PLL1 514 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 TMEM235A6NFC5 223 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 CNIH1O95406 144 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 CD7P09564 240 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 TALDO1P37837 337 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 TPPP2P59282 170 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 CD81P60033 236 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 KLF5Q13887 457 aaPredicted RBP10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 IDNKQ5T6J7 187 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 HACD4Q5VWC8 232 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 OR9G4Q8NGQ1 327 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 OR10J5Q8NHC4 309 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 NUDCD2Q8WVJ2 157 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 OR2D2Q9H210 308 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 ZNF221Q9UK13 617 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 WASHC3Q9Y3C0 194 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 NUBP2Q9Y5Y2 271 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 ETV7Q9Y603 341 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 DNAH17Q9UFH2 4485 aa10.39□□□□□ -0.75
SHKBP1-208ENST00000595726 NUPR2A6NF83 97 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 FCN1O00602 326 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 AIREO43918 545 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 TPPPO94811 219 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 GSTP1P09211 210 aaKnown RBP10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 MC5RP33032 325 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 SYNJ2BPP57105 145 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 LINC00205P59089 165 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 CX3CL1P78423 397 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 LCN12Q6JVE5 192 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 ZNF383Q8NA42 475 aa10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 DRAXINQ8NBI3 349 aaPredicted RBP10.38□□□□□ -0.75
SHKBP1-208ENST00000595726 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms