RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 A0A1W2PPV4 95 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 ZNF320A2RRD8 509 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 C21orf140B9A014 251 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 CD82P27701 267 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 TMPRSS3P57727 454 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 ERVFC1-1P60608 527 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 UBE2NP61088 152 aaKnown RBP11.05□□□□□ -0.64
VRK3-209ENST00000594948 HTD2P86397 168 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 C1orf194Q5T5A4 169 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 SLC25A40Q8TBP6 338 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 COQ2Q96H96 371 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 TMEM204Q9BSN7 226 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 C12orf49Q9H741 205 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 ELOVL5Q9NYP7 299 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 MDFIC2A0A1B0GVS7 189 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 MARCH11A6NNE9 402 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 KLRC4-KLRK1H3BQV0 150 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 SP1P08047 785 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 ADH4P08319 380 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 STAG3L2P0CL84 134 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 STAG3L3P0CL85 134 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 OR10J1P30954 320 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 MEOX1P50221 254 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 SOX8P57073 446 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 SELENOTP62341 195 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 USF2Q15853 346 aaPredicted RBP11.05□□□□□ -0.64
VRK3-209ENST00000594948 CLEC12BQ2HXU8 276 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 ACP7Q6ZNF0 438 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 SFRP2Q96HF1 295 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 CXXC4Q9H2H0 198 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 TUBG2Q9NRH3 451 aa11.05□□□□□ -0.64
VRK3-209ENST00000594948 USF3Q68DE3 2245 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 DOCK11Q5JSL3 2073 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 HCFC1P51610 2035 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 CXorf1O96002 111 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 GRPP07492 148 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 ESDP10768 282 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 ATP5G3P48201 142 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 TGFBR3Q03167 851 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 PSG7Q13046 419 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 DCAF10Q5QP82 559 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 INO80CQ6PI98 192 aaPredicted RBP11.04□□□□□ -0.64
VRK3-209ENST00000594948 BTNL3Q6UXE8 466 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 C11orf53Q8IXP5 236 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 MDS2Q8NDY4 140 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 R3HDM4Q96D70 268 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 LY96Q9Y6Y9 160 aa11.04□□□□□ -0.64
VRK3-209ENST00000594948 LINC00473A8K010 186 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 RBFOX2O43251 390 aaKnown RBP eCLIP11.03□□□□□ -0.64
VRK3-209ENST00000594948 NDUFB4O95168 129 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 HPRT1P00492 218 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 SNRPCP09234 159 aaKnown RBP11.03□□□□□ -0.64
VRK3-209ENST00000594948 OR4A8P0C604 315 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 PLA2G5P39877 138 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 CEBPDP49716 269 aaPredicted RBP11.03□□□□□ -0.64
VRK3-209ENST00000594948 PAFAH1B2P68402 229 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 TLE1Q04724 770 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 AESQ08117 197 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 ZNF124Q15973 351 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 C3AR1Q16581 482 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 CST9LP1Q5W188 147 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 QTRT1Q9BXR0 403 aaKnown RBP11.03□□□□□ -0.64
VRK3-209ENST00000594948 NAGKQ9UJ70 344 aa11.03□□□□□ -0.64
VRK3-209ENST00000594948 DIDO1Q9BTC0 2240 aaKnown RBP11.03□□□□□ -0.64
VRK3-209ENST00000594948 PRSS46E5RG02 174 aa11.02□□□□□ -0.64
VRK3-209ENST00000594948 TCAPO15273 167 aa11.02□□□□□ -0.64
VRK3-209ENST00000594948 RBMXL2O75526 392 aaKnown RBP11.02□□□□□ -0.64
VRK3-209ENST00000594948 CELA3BP08861 270 aa11.02□□□□□ -0.64
VRK3-209ENST00000594948 ZNF883P0CG24 379 aa11.02□□□□□ -0.64
VRK3-209ENST00000594948 ALKBH6Q3KRA9 238 aa11.02□□□□□ -0.64
VRK3-209ENST00000594948 MYPOPQ86VE0 399 aaPredicted RBP11.02□□□□□ -0.64
VRK3-209ENST00000594948 TGIF2LXQ8IUE1 241 aa11.02□□□□□ -0.64
VRK3-209ENST00000594948 SGMS2Q8NHU3 365 aa11.02□□□□□ -0.64
VRK3-209ENST00000594948 PLA2G3Q9NZ20 509 aa11.02□□□□□ -0.64
VRK3-209ENST00000594948 TRAV38-1A0A0B4J264 116 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 C9orf172C9J069 976 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 M0R143 59 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 GALR2O43603 387 aaPredicted RBP11.02□□□□□ -0.65
VRK3-209ENST00000594948 CRYAAP02489 173 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 OR9G9P0C7N8 305 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 C1QTNF9P0C862 333 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 KITLGP21583 273 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 VDAC2P45880 294 aaPredicted RBP11.02□□□□□ -0.65
VRK3-209ENST00000594948 GABRA2P47869 451 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 TEX38Q6PEX7 206 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 OR10G8Q8NGN5 311 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 MRGPRDQ8TDS7 321 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 C11orf52Q96A22 123 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 DNAJC13O75165 2243 aa11.02□□□□□ -0.65
VRK3-209ENST00000594948 C15orf65H3BRN8 121 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 EREGO14944 169 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 SPINT2O43291 252 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 SCGB1D1O95968 90 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 DUTP33316 252 aaKnown RBP11.01□□□□□ -0.65
VRK3-209ENST00000594948 TIMP3P35625 211 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 KIR2DS2P43631 304 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 UBE2G2P60604 165 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 FOXF2Q12947 444 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 SMIM21Q3B7S5 101 aa11.01□□□□□ -0.65
VRK3-209ENST00000594948 ZNF718Q3SXZ3 478 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms