RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 OR7C1O76099 320 aaPredicted RBP12.95□□□□□ -0.34
PNKP-204ENST00000594661 CGAP01215 116 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 CTRLP40313 264 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 BSXQ3C1V8 233 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 FBLN7Q53RD9 439 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 NAA60Q9H7X0 242 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 NECAP2Q9NVZ3 263 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 LAMTOR2Q9Y2Q5 125 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 INTS1Q8N201 2190 aaKnown RBP12.95□□□□□ -0.34
PNKP-204ENST00000594661 COMPP49747 757 aaPredicted RBP12.95□□□□□ -0.34
PNKP-204ENST00000594661 LCN2P80188 198 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 CEACAM21Q3KPI0 293 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 LIAT1Q6ZQX7 453 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 WDR31Q8NA23 367 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 OR4C5Q8NGB2 326 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 ANAPC16Q96DE5 110 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 ZNF442Q9H7R0 627 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 PLEKHF2Q9H8W4 249 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 MSRB2Q9Y3D2 182 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 WIPI2Q9Y4P8 454 aa12.95□□□□□ -0.34
PNKP-204ENST00000594661 ZFP92A6NM28 416 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 M0QZ24 198 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 SMPD2O60906 423 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 AGFG2O95081 481 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 ESDP10768 282 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 BCL3P20749 454 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 INO80CQ6PI98 192 aaPredicted RBP12.94□□□□□ -0.34
PNKP-204ENST00000594661 CXorf67Q86X51 503 aaPredicted RBP12.94□□□□□ -0.34
PNKP-204ENST00000594661 LGI3Q8N145 548 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 CMTM2Q8TAZ6 248 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 OR51I2Q9H344 312 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 SLC2A9Q9NRM0 540 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 PROCRQ9UNN8 238 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 TRAV30A0A087WSZ9 112 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 ZNF205O95201 554 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 TPPP2P59282 170 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 RPL23P62829 140 aaKnown RBP12.94□□□□□ -0.34
PNKP-204ENST00000594661 TBR1Q16650 682 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 LHFPL4Q7Z7J7 247 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 OR5L1Q8NGL2 311 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 MBD3L1Q8WWY6 194 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 LIME1Q9H400 295 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 ZNF665Q9H7R5 613 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 ZNF286AQ9HBT8 521 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 UQCR10Q9UDW1 63 aa12.94□□□□□ -0.34
PNKP-204ENST00000594661 K7ENP7 123 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 BMI1P35226 326 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 PIGPP57054 158 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 TAS2R30P59541 319 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 OCIAD2Q56VL3 154 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 CST9LP1Q5W188 147 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 FAM180AQ6UWF9 173 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 C1orf162Q8NEQ5 155 aaPredicted RBP12.93□□□□□ -0.34
PNKP-204ENST00000594661 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 TOMM40LQ969M1 308 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 SMIM7Q9BQ49 75 aa12.93□□□□□ -0.34
PNKP-204ENST00000594661 WDR1O75083 606 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 KBTBD11O94819 623 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 BMP5P22003 454 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 GCH1P30793 250 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 RUNX1Q01196 453 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 DAZAP2Q15038 168 aaPredicted RBP12.92□□□□□ -0.34
PNKP-204ENST00000594661 SP6Q3SY56 376 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 ZNF787Q6DD87 383 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 TMEM252Q8N6L7 170 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 OR5C1Q8NGR4 320 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 RNF2Q99496 336 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 ZNF71Q9NQZ8 489 aaPredicted RBP12.92□□□□□ -0.34
PNKP-204ENST00000594661 PXMP4Q9Y6I8 212 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 A0A1B0GUS0 222 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 ANKRD30BLA7E2S9 258 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 IGKV3-15P01624 115 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 CD33P20138 364 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 APOBEC3AP31941 199 aaPredicted RBP12.92□□□□□ -0.34
PNKP-204ENST00000594661 CDKN1AP38936 164 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 DYNLT3P51808 116 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 FXYD4P59646 89 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 PPP1CBP62140 327 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 MRPL49Q13405 166 aaKnown RBP12.92□□□□□ -0.34
PNKP-204ENST00000594661 IGFBP7Q16270 282 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 ZNF324BQ6AW86 544 aaPredicted RBP12.92□□□□□ -0.34
PNKP-204ENST00000594661 MRGPRGQ86SM5 289 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 SAXO1Q8IYX7 474 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 Q8NA96 180 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 VN1R17PQ8TDU5 208 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 OR5P3Q8WZ94 311 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 MSI2Q96DH6 328 aaKnown RBP12.92□□□□□ -0.34
PNKP-204ENST00000594661 BTF3L4Q96K17 158 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 MANBALQ9NQG1 85 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 SH3BGRL2Q9UJC5 107 aa12.92□□□□□ -0.34
PNKP-204ENST00000594661 J3QW42 95 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 NBEAP1P0C6P0 100 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 ZNF728P0DKX0 622 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 BAXQ07812 192 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 TMEM211Q6ICI0 200 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 OR5A2Q8NGI9 324 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 RPUSD4Q96CM3 377 aaKnown RBP12.91□□□□□ -0.34
PNKP-204ENST00000594661 MTCH1Q9NZJ7 389 aa12.91□□□□□ -0.34
PNKP-204ENST00000594661 TRAPPC2LH3BP13 241 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms