RNA–Protein interactions for RNA: ENST00000592208.5

RAVER1-204, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

TSL 1 (best)

Gene RAVER1, Length 4,693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-204ENST00000592208 HIST1H1BP16401 226 aaKnown RBP12.53□□□□□ -0.4
RAVER1-204ENST00000592208 SNRPEP62304 92 aaKnown RBP12.53□□□□□ -0.4
RAVER1-204ENST00000592208 SNAI3Q3KNW1 292 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 TBX6O95947 436 aaPredicted RBP12.53□□□□□ -0.4
RAVER1-204ENST00000592208 LINC00869P0C866 280 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 AREGP15514 252 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 OR10J6PQ8NGY7 276 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 TAF15Q92804 592 aaKnown RBP eCLIP12.53□□□□□ -0.4
RAVER1-204ENST00000592208 SMIM8Q96KF7 97 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 PKDREJQ9NTG1 2253 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 LOC105371242A0A075B767 164 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 ACAA1P09110 424 aaPredicted RBP12.53□□□□□ -0.4
RAVER1-204ENST00000592208 RPL7P18124 248 aaKnown RBP12.53□□□□□ -0.4
RAVER1-204ENST00000592208 QTRT1Q9BXR0 403 aaKnown RBP12.53□□□□□ -0.4
RAVER1-204ENST00000592208 IFT22Q9H7X7 185 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 CHD5Q8TDI0 1954 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 SS18L1O75177 396 aaPredicted RBP12.53□□□□□ -0.4
RAVER1-204ENST00000592208 S1PR2O95136 353 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 REG1BP48304 166 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 ERVS71-1P61550 626 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 CFHR1Q03591 330 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 MUC15Q8N387 334 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 FADS6Q8N9I5 356 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 BET1LQ9NYM9 111 aa12.53□□□□□ -0.4
RAVER1-204ENST00000592208 LDLRAD3Q86YD5 345 aa12.52□□□□□ -0.4
RAVER1-204ENST00000592208 TPRX1Q8N7U7 411 aa12.52□□□□□ -0.4
RAVER1-204ENST00000592208 ZNF708P17019 499 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 UBE2V2Q15819 145 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 ABHD12Q8N2K0 398 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 A0A1W2PP11 408 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 RD3LP0DJH9 198 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 MEF2BQ02080 365 aaPredicted RBP12.52□□□□□ -0.41
RAVER1-204ENST00000592208 LBHQ53QV2 105 aaPredicted RBP12.52□□□□□ -0.41
RAVER1-204ENST00000592208 ZNF826PQ6ZT77 177 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 MYOZ3Q8TDC0 251 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 TMEM140Q9NV12 185 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 RAXQ9Y2V3 346 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 MTCL1Q9Y4B5 1905 aaKnown RBP12.52□□□□□ -0.41
RAVER1-204ENST00000592208 RALGAPA1Q6GYQ0 2036 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 RAMP1O60894 148 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 PSG9Q00887 426 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 ZNF146Q15072 292 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 TMEM56-RWDD3S4R434 201 aa12.52□□□□□ -0.41
RAVER1-204ENST00000592208 SIAH2O43255 324 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 MEF2CQ06413 473 aaPredicted RBP12.51□□□□□ -0.41
RAVER1-204ENST00000592208 TNFRSF9Q07011 255 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 RNFT1Q5M7Z0 435 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 SPANXN1Q5VSR9 72 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 UNQ5815/PRO19632Q6UWF5 114 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 OR5AU1Q8NGC0 362 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 FLVCR1-AS1Q8TAF5 88 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 GPR146Q96CH1 333 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 TM2D1Q9BX74 207 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 MRPL32Q9BYC8 188 aaKnown RBP12.51□□□□□ -0.41
RAVER1-204ENST00000592208 IGLV3-32A0A0A0MS00 114 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 NTN3O00634 580 aaPredicted RBP12.51□□□□□ -0.41
RAVER1-204ENST00000592208 OR2D3Q8NGH3 330 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 OSR1Q8TAX0 266 aaPredicted RBP12.51□□□□□ -0.41
RAVER1-204ENST00000592208 FAM57AQ8TBR7 257 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 A0A1W2PPE3 182 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 MARCH11A6NNE9 402 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 PF4V1P10720 104 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 ATP5J2P56134 94 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 LINC00114Q6XXX2 140 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 SELENOHQ8IZQ5 122 aaKnown RBP12.51□□□□□ -0.41
RAVER1-204ENST00000592208 SYT8Q8NBV8 401 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 GATAD1Q8WUU5 269 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 RBKSQ9H477 322 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 DNAJC4Q9NNZ3 241 aa12.51□□□□□ -0.41
RAVER1-204ENST00000592208 MED19A0JLT2 244 aaPredicted RBP12.5□□□□□ -0.41
RAVER1-204ENST00000592208 PTBP3O95758 552 aaKnown RBP12.5□□□□□ -0.41
RAVER1-204ENST00000592208 APCSP02743 223 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 C8orf88P0DMB2 117 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 A0A0G2JMM0 328 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 A0A1W2PPB8 328 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 A0A1W2PRS3 328 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 KIR3DP1A8MWS1 328 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 PLSCR2Q9NRY7 297 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 HILPDAQ9Y5L2 63 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 CYB5R3P00387 301 aaPredicted RBP12.5□□□□□ -0.41
RAVER1-204ENST00000592208 TUSC1Q2TAM9 212 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 RTN4RL2Q86UN3 420 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 LINC00052Q96N35 136 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 GGACTQ9BVM4 153 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 hCG_38984A0A1B0GV85 526 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 SUCLG1P53597 346 aaKnown RBP12.5□□□□□ -0.41
RAVER1-204ENST00000592208 CLDN18P56856 261 aa12.5□□□□□ -0.41
RAVER1-204ENST00000592208 RELQ04864 619 aaPredicted RBP12.5□□□□□ -0.41
RAVER1-204ENST00000592208 SNURFLB1AK76 121 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 SMIM6P0DI80 62 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 UNC119Q13432 240 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 OR51G1Q8NGK1 321 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 MEGF10Q96KG7 1140 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
RAVER1-204ENST00000592208 TCF19Q9Y242 345 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 TSPOP30536 169 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 TCL1AP56279 114 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 RELBQ01201 579 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 C1QTNF5Q9BXJ0 243 aa12.49□□□□□ -0.41
RAVER1-204ENST00000592208 NPIPB6E9PJ23 425 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms