RNA–Protein interactions for RNA: ENST00000590898.5

RPRD1A-209, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 1 (best) BASIC

Gene RPRD1A, Length 1,945 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-209ENST00000590898 C11orf88Q6PI97 169 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 TMEM86BQ8N661 226 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 OR2T35Q8NGX2 323 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 SDHAF2Q9NX18 166 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 POMT1Q9Y6A1 747 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 MDFIC2A0A1B0GVS7 189 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 OR2A4O95047 310 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 SFT2D2O95562 160 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 DUS4LO95620 317 aaKnown RBP13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 PIGPP57054 158 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 ANKRD55Q3KP44 614 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 RPL39P5Q59GN2 51 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 KCTD9Q7L273 389 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 THNSL2Q86YJ6 484 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 OR5R1Q8NH85 324 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 SECTM1Q8WVN6 248 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 AKR1E2Q96JD6 320 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 OR2A7Q96R45 310 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 JMJD8Q96S16 334 aa13.74□□□□□ -0.21
RPRD1A-209ENST00000590898 FAM90A9PA6NNJ1 464 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 IFNA2P01563 188 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 IGLV2-14P01704 120 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 PAX6P26367 422 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 ECI1P42126 302 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 REG1BP48304 166 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 GRPEL2Q8TAA5 225 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 PIFOQ8TCI5 191 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 ZNF486Q96H40 463 aaPredicted RBP13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 GPHA2Q96T91 129 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 PHB2Q99623 299 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 SLC5A7Q9GZV3 580 aa13.73□□□□□ -0.21
RPRD1A-209ENST00000590898 CLDN34H7C241 214 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 TIMM23O14925 209 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 GIPP09681 153 aaPredicted RBP13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 CD1BP29016 333 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 GNRHRP30968 328 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 HILS1P60008 231 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 TAGLNQ01995 201 aaKnown RBP13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 DRAM1Q8N682 238 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 CFHR4Q92496 578 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 NABP2Q9BQ15 211 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 SLC2A9Q9NRM0 540 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 CT45A6P0DMU7 189 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 CT45A5P0DMU8 189 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 CT45A7P0DMV0 189 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 MOB3BQ86TA1 216 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 OR5M8Q8NGP6 311 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 ZFAND1Q8TCF1 268 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 ADTRPQ96IZ2 230 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 RSRP1Q9BUV0 290 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 CCL28Q9NRJ3 127 aa13.72□□□□□ -0.21
RPRD1A-209ENST00000590898 BTBD17A6NE02 478 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 CRYM-AS1A6NIL9 109 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 DBX1A6NMT0 343 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 HOXA3O43365 443 aaPredicted RBP13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 TCF21O43680 179 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 MC5RP33032 325 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 LAMTOR1Q6IAA8 161 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 ZNF818PQ6ZRF7 136 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 SLC38A6Q8IZM9 456 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 BVESQ8NE79 360 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 OR5AN1Q8NGI8 311 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 HSD17B10Q99714 261 aaKnown RBP13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 PITPNC1Q9UKF7 332 aa13.71□□□□□ -0.21
RPRD1A-209ENST00000590898 TEX13DA0A0J9YY54 714 aaPredicted RBP13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 H3BUX3 64 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 M0R1X1 148 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 ADAP1O75689 374 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 FAM106CPP0CH98 169 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 DUTP33316 252 aaKnown RBP13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 RAB13P51153 203 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 EBI3Q14213 229 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 SP6Q3SY56 376 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 ABCA11PQ4W5N1 156 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 ZNF66Q6ZN08 573 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 CMTM1Q8IZ96 169 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 C5orf30Q96GV9 206 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 SEC22AQ96IW7 307 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 MRPL20Q9BYC9 149 aaKnown RBP13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 MPTX1A8MV57 137 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 FAM25EA8MYX2 175 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 THBS3P49746 956 aa13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 EIF4EBP1Q13541 118 aaPredicted RBP13.7□□□□□ -0.22
RPRD1A-209ENST00000590898 GPR31O00270 319 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 OR5AC1P0C628 307 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 RAP2BP61225 183 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 LIAT1Q6ZQX7 453 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 SGPP2Q8IWX5 399 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 HYLS1Q96M11 299 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 NAA60Q9H7X0 242 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 ESM1Q9NQ30 184 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 TCF19Q9Y242 345 aa13.69□□□□□ -0.22
RPRD1A-209ENST00000590898 H0YJW9 148 aa13.68□□□□□ -0.22
RPRD1A-209ENST00000590898 S100GP29377 79 aa13.68□□□□□ -0.22
RPRD1A-209ENST00000590898 C9orf62Q8N4C0 152 aa13.68□□□□□ -0.22
RPRD1A-209ENST00000590898 ZNF383Q8NA42 475 aa13.68□□□□□ -0.22
RPRD1A-209ENST00000590898 RANBP3Q9H6Z4 567 aaPredicted RBP13.68□□□□□ -0.22
RPRD1A-209ENST00000590898 VPREB3Q9UKI3 123 aa13.68□□□□□ -0.22
RPRD1A-209ENST00000590898 DNAJC9-AS1A6NH13 148 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms