RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 RRNAD1Q96FB5 475 aaKnown RBP5.98□□□□□ -1.45
SMAD4-210ENST00000590061 ABHD14BQ96IU4 210 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 Q96MF0 132 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 AGMATQ9BSE5 352 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 RTBDNQ9BSG5 229 aaPredicted RBP5.98□□□□□ -1.45
SMAD4-210ENST00000590061 OR2D2Q9H210 308 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 C5orf66Q9H5L9 145 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 NARFLQ9H6Q4 476 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 PLEKHA2Q9HB19 425 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 RAB18Q9NP72 206 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 COMMD9Q9P000 198 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 OR1A1Q9P1Q5 309 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 TMED3Q9Y3Q3 217 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 MYO9AB2RTY4 2548 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 ITPR3Q14573 2671 aa5.98□□□□□ -1.45
SMAD4-210ENST00000590061 CSPG4Q6UVK1 2322 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 TRAV39A0A0B4J263 110 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 A0A1B0GW55 424 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 C9orf170A2RU37 121 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 HMX3A6NHT5 357 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 FAM90A9PA6NNJ1 464 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 C22orf46C9J442 243 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 BUB1B-PAK6H3BSN5 160 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 M0R1X1 148 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 SCAF4O95104 1147 aaKnown RBP5.97□□□□□ -1.45
SMAD4-210ENST00000590061 IGLV1-47P01700 117 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DUX4L2P0CJ85 424 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DUX4L3P0CJ86 424 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DUX4L4P0CJ87 422 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DUX4L5P0CJ88 424 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DUX4L6P0CJ89 424 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DUX4L7P0CJ90 424 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 SLC25A6P12236 298 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 CCL3L1P16619 93 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 HLA-GP17693 338 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 VDAC1P21796 283 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 LGALS7P47929 136 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 KRTAP10-9P60411 292 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 PAX2Q02962 417 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 LTC4SQ16873 150 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 TMEM249Q2WGJ8 235 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 HLA-DRB5Q30154 266 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 CT45A1Q5HYN5 189 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 ZNF626Q68DY1 528 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 THOC7Q6I9Y2 204 aaKnown RBP5.97□□□□□ -1.45
SMAD4-210ENST00000590061 FAAP20Q6NZ36 180 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DUX4L9Q6RFH8 374 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-210ENST00000590061 ZNF833PQ6ZTB9 187 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 TBC1D26Q86UD7 250 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 PDPNQ86YL7 162 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DRAM1Q8N682 238 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 ZNF439Q8NDP4 499 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 OR4C13Q8NGP0 309 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 CT45A3Q8NHU0 189 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 OSR1Q8TAX0 266 aaPredicted RBP5.97□□□□□ -1.45
SMAD4-210ENST00000590061 NANPQ8TBE9 248 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 UPRTQ96BW1 309 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 TMEM222Q9H0R3 208 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 HIF1ANQ9NWT6 349 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 FKBP11Q9NYL4 201 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 DUX4Q9UBX2 424 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 VSIG4Q9Y279 399 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 FAM96BQ9Y3D0 163 aa5.97□□□□□ -1.45
SMAD4-210ENST00000590061 PRRC2AP48634 2157 aaKnown RBP5.97□□□□□ -1.45
SMAD4-210ENST00000590061 ANKRD34BA5PLL1 514 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 UBE2CO00762 179 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 HSD17B6O14756 317 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 PFDN1O60925 122 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 CDS2O95674 445 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 HPRT1P00492 218 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 TGFAP01135 160 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 PLA2G1BP04054 148 aaKnown RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 TFF1P04155 84 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 ARG1P05089 322 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 FAM106CPP0CH98 169 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 ANXA7P20073 488 aaKnown RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 C4BPBP20851 252 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 OMGP23515 440 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 UCP1P25874 307 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 ZFP36P26651 326 aaKnown RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 RRAS2P62070 204 aaPredicted RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 ZNF816Q0VGE8 651 aaPredicted RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 PHLDA2Q53GA4 152 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 Q6ZPA2 131 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 ZNF818PQ6ZRF7 136 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 TCF23Q7RTU1 214 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 VMO1Q7Z5L0 202 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 PNKDQ8N490 385 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 OR51H1Q8NH63 302 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 OR4A5Q8NH83 315 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 RNASE11Q8TAA1 199 aaKnown RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 TCTEX1D2Q8WW35 142 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 NRGNQ92686 78 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 RBPMSQ93062 196 aaKnown RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 LHX4Q969G2 390 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 LSM10Q969L4 123 aaKnown RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 TMEM56Q96MV1 263 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 TSNAXQ99598 290 aaKnown RBP5.96□□□□□ -1.46
SMAD4-210ENST00000590061 KRTAP4-11Q9BYQ6 195 aa5.96□□□□□ -1.46
SMAD4-210ENST00000590061 FXYD6Q9H0Q3 95 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms