RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CRYZL1O95825 349 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 IGKV1-16P04430 117 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 H2AFB2P0C5Z0 115 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 RGS21Q2M5E4 152 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 FBLN7Q53RD9 439 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 TMEM128Q5BJH2 165 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 DHRS7BQ6IAN0 325 aaPredicted RBP12.16□□□□□ -0.46
ATG4D-211ENST00000589753 C11orf88Q6PI97 169 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 PLET1Q6UQ28 207 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 SLC25A42Q86VD7 318 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 OR4C13Q8NGP0 309 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 FLYWCH2Q96CP2 140 aaKnown RBP12.16□□□□□ -0.46
ATG4D-211ENST00000589753 VPREB3Q9UKI3 123 aa12.16□□□□□ -0.46
ATG4D-211ENST00000589753 NAV3Q8IVL0 2385 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 A6NDX4 124 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 DNAJC9-AS1A6NH13 148 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 H0Y980 276 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 B3GALNT1O75752 331 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 ANXA7P20073 488 aaKnown RBP12.15□□□□□ -0.46
ATG4D-211ENST00000589753 HILS1P60008 231 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
ATG4D-211ENST00000589753 RPS16P62249 146 aaKnown RBP12.15□□□□□ -0.46
ATG4D-211ENST00000589753 DHODHQ02127 395 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 SLC9A3R2Q15599 337 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 TMEM177Q53S58 311 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 CCBE1Q6UXH8 406 aaPredicted RBP12.15□□□□□ -0.46
ATG4D-211ENST00000589753 TMEM219Q86XT9 240 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 Q8N6K4 173 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 JMJD8Q96S16 334 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 TP53RKQ96S44 253 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 RNF5Q99942 180 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 FAM212BQ9NTI7 297 aaPredicted RBP12.15□□□□□ -0.46
ATG4D-211ENST00000589753 KCNIP3Q9Y2W7 256 aa12.15□□□□□ -0.46
ATG4D-211ENST00000589753 A0A0A6YYJ9 748 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 SHOXO15266 292 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 TCF21O43680 179 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 PEX14O75381 377 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 HPRT1P00492 218 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 SERPINE2P07093 398 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 OR5AC1P0C628 307 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 SPNP16150 400 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 VAMP1P23763 118 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 LPAR6P43657 344 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 SUPT4H1P63272 117 aaKnown RBP12.14□□□□□ -0.47
ATG4D-211ENST00000589753 PPP1R1AQ13522 171 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 SP6Q3SY56 376 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 LIAT1Q6ZQX7 453 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 OSR1Q8TAX0 266 aaPredicted RBP12.14□□□□□ -0.47
ATG4D-211ENST00000589753 ZFAND2BQ8WV99 257 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 GALNT14Q96FL9 552 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 RITA1Q96K30 269 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 HARBI1Q96MB7 349 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 RBM14Q96PK6 669 aaKnown RBP12.14□□□□□ -0.47
ATG4D-211ENST00000589753 DUX5Q96PT3 197 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 ALX4Q9H161 411 aaPredicted RBP12.14□□□□□ -0.47
ATG4D-211ENST00000589753 BEX1Q9HBH7 125 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 ESM1Q9NQ30 184 aa12.14□□□□□ -0.47
ATG4D-211ENST00000589753 FN1P02751 2386 aaKnown RBP12.13□□□□□ -0.47
ATG4D-211ENST00000589753 CLDN34H7C241 214 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 OR2F2O95006 317 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 S1PR2O95136 353 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 IFNA2P01563 188 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 OR4E1P0C645 316 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 VSIG10L2P0DP72 767 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 ANXA3P12429 323 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 UCP1P25874 307 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 LGALS7P47929 136 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 MECP2P51608 486 aaKnown RBP12.13□□□□□ -0.47
ATG4D-211ENST00000589753 RAB25P57735 213 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 MMDQ15546 238 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 C4orf46Q504U0 113 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 ZNF585BQ52M93 769 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 C16orf82Q7Z2V1 217 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 OR8H1Q8NGG4 311 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
ATG4D-211ENST00000589753 SLC25A33Q9BSK2 321 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 CHIAQ9BZP6 476 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 TMEM222Q9H0R3 208 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 PLEKHA2Q9HB19 425 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
ATG4D-211ENST00000589753 NSD1Q96L73 2696 aaPredicted RBP12.12□□□□□ -0.47
ATG4D-211ENST00000589753 NCBP2LA6PVI3 153 aaKnown RBP12.12□□□□□ -0.47
ATG4D-211ENST00000589753 INMT-MINDY4F8WBC2 141 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 SFT2D2O95562 160 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 HRASP01112 189 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
ATG4D-211ENST00000589753 RPA2P15927 270 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 CNTFRP26992 372 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 F2RL1P55085 397 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 TMEM187Q14656 261 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 TRIM16LQ309B1 348 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 NPBQ8NG41 125 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 GLYATL2Q8WU03 294 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 MARVELD1Q9BSK0 173 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 RAB18Q9NP72 206 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 COMMD9Q9P000 198 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 MOB4Q9Y3A3 225 aa12.12□□□□□ -0.47
ATG4D-211ENST00000589753 ANK3Q12955 4377 aaKnown RBP12.11□□□□□ -0.47
ATG4D-211ENST00000589753 C9orf170A2RU37 121 aa12.11□□□□□ -0.47
ATG4D-211ENST00000589753 SRRM4A7MD48 611 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms