RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 CLCC1Q96S66 551 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 NDRG3Q9UGV2 375 aa12.63□□□□□ -0.39
MBD1-217ENST00000588937 DYSFO75923 2080 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 RAI1Q7Z5J4 1906 aaPredicted RBP12.62□□□□□ -0.39
MBD1-217ENST00000588937 DSPP15924 2871 aaKnown RBP12.62□□□□□ -0.39
MBD1-217ENST00000588937 A0A1B0GV50 99 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 hADV38S2A0JD32 116 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 NQO2P16083 231 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 THBS3P49746 956 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 TLE1Q04724 770 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 AARDQ4LEZ3 155 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 SP5Q6BEB4 398 aaPredicted RBP12.62□□□□□ -0.39
MBD1-217ENST00000588937 OR8G2PQ6IF36 304 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 OR10P1Q8NGE3 313 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 OR4A16Q8NH70 328 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 OR4S2Q8NH73 311 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 TAF15Q92804 592 aaKnown RBP eCLIP12.62□□□□□ -0.39
MBD1-217ENST00000588937 WFIKKN1Q96NZ8 548 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 RSG1Q9BU20 258 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 TMEM147Q9BVK8 224 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 SAP30LQ9HAJ7 183 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 CACNA1DQ01668 2161 aa12.62□□□□□ -0.39
MBD1-217ENST00000588937 ZG16O60844 167 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 SFTPCP11686 197 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 LINC00205P59089 165 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 KLRB1Q12918 225 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 RPL39P5Q59GN2 51 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 PRAMEF5Q5TYX0 476 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 ADAM5Q6NVV9 412 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 OR10A7Q8NGE5 316 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 TANC2Q9HCD6 1990 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 DSCAMO60469 2012 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 UBE2L5PA0A1B0GUS4 154 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 SPCS3P61009 180 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 GNB2P62879 340 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 CCL20P78556 96 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 MEF2CQ06413 473 aaPredicted RBP12.61□□□□□ -0.39
MBD1-217ENST00000588937 TMEM41BQ5BJD5 291 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 CT45A1Q5HYN5 189 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 CENPVQ7Z7K6 275 aaPredicted RBP12.61□□□□□ -0.39
MBD1-217ENST00000588937 CBLN2Q8IUK8 224 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 FAM216BQ8N7L0 139 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 CT45A3Q8NHU0 189 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 SMCO4Q9NRQ5 59 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 LINC00312Q9Y6C7 94 aa12.61□□□□□ -0.39
MBD1-217ENST00000588937 PPIAL4EA0A075B759 164 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 TRGV8A0A0C4DH27 118 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 PPIAL4DF5H284 164 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 H7C2Y5 167 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 TMPRSS2O15393 492 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 IFNA17P01571 189 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 OR9G9P0C7N8 305 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 PPIAL4FP0DN26 164 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 NDUFB7P17568 137 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 SOHLH1Q5JUK2 328 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 ZNF506Q5JVG8 444 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 NCMAPQ5T1S8 102 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 DUX4L9Q6RFH8 374 aaPredicted RBP12.6□□□□□ -0.39
MBD1-217ENST00000588937 MBD3L1Q8WWY6 194 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 DDB2Q92466 427 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 ZDHHC16Q969W1 377 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 QTRT1Q9BXR0 403 aaKnown RBP12.6□□□□□ -0.39
MBD1-217ENST00000588937 GAL3ST2Q9H3Q3 398 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 RPRMQ9NS64 109 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 PPIAL4AQ9Y536 164 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 DSCAML1Q8TD84 2053 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 CADP27708 2225 aa12.6□□□□□ -0.39
MBD1-217ENST00000588937 PMS2P5A8MQ11 134 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 SLC31A2O15432 143 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 MBP02144 154 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 HSPB1P04792 205 aaKnown RBP12.59□□□□□ -0.39
MBD1-217ENST00000588937 NFYBP25208 207 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 MRPS11P82912 194 aaKnown RBP12.59□□□□□ -0.39
MBD1-217ENST00000588937 PDLIM3Q53GG5 364 aaPredicted RBP12.59□□□□□ -0.39
MBD1-217ENST00000588937 KHDC3LQ587J8 217 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 TCF23Q7RTU1 214 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 ZNF439Q8NDP4 499 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 RARRES2Q99969 163 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 MS4A5Q9H3V2 200 aa12.59□□□□□ -0.39
MBD1-217ENST00000588937 SLC25A10Q9UBX3 287 aaPredicted RBP12.59□□□□□ -0.39
MBD1-217ENST00000588937 SAA2-SAA4A0A096LPE2 208 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 TMEM178BH3BS89 294 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 M0R036 132 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 IGHV3-7P01780 117 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 SAA2P0DJI9 122 aaPredicted RBP12.58□□□□□ -0.39
MBD1-217ENST00000588937 OR13C7P0DN81 318 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 LYG1Q8N1E2 194 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 CLDND2Q8NHS1 167 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 RNASE6Q93091 150 aaKnown RBP12.58□□□□□ -0.39
MBD1-217ENST00000588937 DYNLRB1Q9NP97 96 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 RPUSD1Q9UJJ7 312 aaKnown RBP12.58□□□□□ -0.39
MBD1-217ENST00000588937 SPTA1P02549 2419 aa12.58□□□□□ -0.39
MBD1-217ENST00000588937 SHISA9B4DS77 424 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 RHEBQ15382 184 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 HAGHQ16775 308 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 VWC2Q2TAL6 325 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 ZNF787Q6DD87 383 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 SSX9Q7RTT3 188 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 ZNF429Q86V71 674 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms