RNA–Protein interactions for RNA: ENST00000586718.1

NPC1-204, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 3

Gene NPC1, Length 574 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-204ENST00000586718 TBX15Q96SF7 602 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 FOXC2Q99958 501 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 NABP2Q9BQ15 211 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 MMP26Q9NRE1 261 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 HIF1ANQ9NWT6 349 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 GSKIPQ9P0R6 139 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 DPM3Q9P2X0 92 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 MMP24Q9Y5R2 645 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 AUP1Q9Y679 476 aa6.94□□□□□ -1.3
NPC1-204ENST00000586718 ASH1LQ9NR48 2969 aaKnown RBP6.93□□□□□ -1.3
NPC1-204ENST00000586718 FXYD6-FXYD2A0A087WZ82 144 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 A0A1B0GU03 582 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 MARCH11A6NNE9 402 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 RNASEK-C17orf49H0YIS7 233 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 H0YJW9 148 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 RAMP3O60896 148 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 RBMXL2O75526 392 aaKnown RBP6.93□□□□□ -1.3
NPC1-204ENST00000586718 SNAPC5O75971 98 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 RLN2P04090 185 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 CT45A6P0DMU7 189 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 CT45A5P0DMU8 189 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 CT45A7P0DMV0 189 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 SLC25A6P12236 298 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 PVALBP20472 110 aaPredicted RBP6.93□□□□□ -1.3
NPC1-204ENST00000586718 C4BPBP20851 252 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 NUP62P37198 522 aaPredicted RBP6.93□□□□□ -1.3
NPC1-204ENST00000586718 DLX1P56177 255 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 PRB3Q04118 309 aaPredicted RBP6.93□□□□□ -1.3
NPC1-204ENST00000586718 PAX8Q06710 450 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 CD300CQ08708 224 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 LRRC37A5PQ49AS3 106 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 MIDNQ504T8 468 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 ZNF585BQ52M93 769 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 NMSQ5H8A3 153 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 GPR157Q5UAW9 335 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 H2BFWTQ7Z2G1 175 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 MOB3BQ86TA1 216 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 NOXA1Q86UR1 476 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 ZNF383Q8NA42 475 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 VSTM2AQ8TAG5 236 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 OSR1Q8TAX0 266 aaPredicted RBP6.93□□□□□ -1.3
NPC1-204ENST00000586718 THAP6Q8TBB0 222 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 PPP1R1CQ8WVI7 109 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 ST6GALNAC6Q969X2 333 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 SEC22AQ96IW7 307 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 OR10C1Q96KK4 312 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 HYLS1Q96M11 299 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 HARBI1Q96MB7 349 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 CACNG5Q9UF02 275 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 CACFD1Q9UGQ2 172 aa6.93□□□□□ -1.3
NPC1-204ENST00000586718 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.93□□□□□ -1.37e-11■■□□□ 13.4
NPC1-204ENST00000586718 MAP1AP78559 2803 aaPredicted RBP6.92□□□□□ -1.3
NPC1-204ENST00000586718 A0A096LNT2 108 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 TRAV40A0A0B4J280 105 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 IGHV1-3A0A0C4DH29 117 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 A0A1W2PRD5 423 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 A0A1W2PRF3 423 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 A0A1W2PRM7 423 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 FAM90A9PA6NNJ1 464 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 SMLR1H3BR10 107 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 NPFFO15130 113 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 SHOXO15266 292 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 ST8SIA3O43173 380 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 KRASP01116 189 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 IGKV1-39P01597 117 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 IGKV1-5P01602 117 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 IGKV1D-39P04432 117 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 PSMB6P28072 239 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 G6PCP35575 357 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 NKX2-1P43699 371 aaPredicted RBP6.92□□□□□ -1.3
NPC1-204ENST00000586718 TMEM249Q2WGJ8 235 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 VMA21Q3ZAQ7 101 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 PDZD9Q8IXQ8 264 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 TEX29Q8N6K0 151 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 OR5AN1Q8NGI8 311 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 OR4C13Q8NGP0 309 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 OR4A16Q8NH70 328 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 FLYWCH2Q96CP2 140 aaKnown RBP6.92□□□□□ -1.3
NPC1-204ENST00000586718 CLCC1Q96S66 551 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 MS4A7Q9GZW8 240 aaPredicted RBP6.92□□□□□ -1.3
NPC1-204ENST00000586718 C7orf69Q9H7B7 122 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 TMEM140Q9NV12 185 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 COA4Q9NYJ1 87 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 LSM5Q9Y4Y9 91 aaKnown RBP6.92□□□□□ -1.3
NPC1-204ENST00000586718 CR1P17927 2039 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 CSMD2Q7Z408 3487 aa6.92□□□□□ -1.3
NPC1-204ENST00000586718 IGHV1-69DA0A0B4J2H0 117 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 A0A1W2PPI3 338 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 MPTX1A8MV57 137 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 FAM90A26D6RGX4 464 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 L7N2F9 121 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 PROP1O75360 226 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 MED6O75586 246 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 MPC2O95563 127 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 TGFAP01135 160 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 IGHV1-69P01742 117 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 IGHV4-31P0DP07 118 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 BRS3P32247 399 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 SAA4P35542 130 aa6.91□□□□□ -1.3
NPC1-204ENST00000586718 VAMP2P63027 116 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms