RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 COA4Q9NYJ1 87 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 PRRC2AP48634 2157 aaKnown RBP16.69■□□□□ 0.26
ATG4D-204ENST00000586417 A0A087X0M5 115 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 A0A1B0GX30 115 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 SSSCA1O60232 199 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 FCGR3BO75015 233 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 TMEM50AO95807 157 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 LRRC75A-AS1Q8N1F1 130 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 C8orf46Q8TAG6 207 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 STOML3Q8TAV4 291 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 ZNF596Q8TC21 504 aa16.69■□□□□ 0.26
ATG4D-204ENST00000586417 GPR137BO60478 399 aa16.68■□□□□ 0.26
ATG4D-204ENST00000586417 ATG12O94817 140 aa16.68■□□□□ 0.26
ATG4D-204ENST00000586417 CLEC12BQ2HXU8 276 aa16.68■□□□□ 0.26
ATG4D-204ENST00000586417 MIDNQ504T8 468 aa16.68■□□□□ 0.26
ATG4D-204ENST00000586417 GPR157Q5UAW9 335 aa16.68■□□□□ 0.26
ATG4D-204ENST00000586417 C8orf31Q8N9H6 132 aa16.68■□□□□ 0.26
ATG4D-204ENST00000586417 SCARB1Q8WTV0 552 aa16.68■□□□□ 0.26
ATG4D-204ENST00000586417 RAB39BQ96DA2 213 aa16.68■□□□□ 0.26
ATG4D-204ENST00000586417 ZANQ9Y493 2812 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 VWC2LB2RUY7 222 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 IGHV1-8P0DP01 117 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 MMP9P14780 707 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 KRTAP1-3Q8IUG1 177 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 ZNF383Q8NA42 475 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 BSCL2Q96G97 398 aaPredicted RBP16.67■□□□□ 0.26
ATG4D-204ENST00000586417 S1PR3Q99500 378 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 PIMREGQ9BSJ6 248 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 PATZ1Q9HBE1 687 aaKnown RBP16.67■□□□□ 0.26
ATG4D-204ENST00000586417 FBXL17Q9UF56 701 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 PRELID3BQ9Y3B1 194 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 ITPR3Q14573 2671 aa16.67■□□□□ 0.26
ATG4D-204ENST00000586417 CHST1O43916 411 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 HPRT1P00492 218 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 PVALBP20472 110 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-204ENST00000586417 KIR2DS2P43631 304 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 THBS3P49746 956 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 PAX9P55771 341 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 CLLU1Q5K131 121 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 ZNF833PQ6ZTB9 187 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 LINC00311Q8N616 119 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 OR2C3Q8N628 320 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 ZC4H2Q9NQZ6 224 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 ITGB1BP2Q9UKP3 347 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 ARHGAP32A7KAX9 2087 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 MARCH11A6NNE9 402 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 NDUFS8O00217 210 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 TAAR5O14804 337 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 Q5PR19 223 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 LY6G5BQ8NDX9 201 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 R3HDM4Q96D70 268 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 ADTRPQ96IZ2 230 aa16.66■□□□□ 0.26
ATG4D-204ENST00000586417 LYRM2Q9NU23 88 aaPredicted RBP16.66■□□□□ 0.26
ATG4D-204ENST00000586417 C22orf46C9J442 243 aa16.65■□□□□ 0.26
ATG4D-204ENST00000586417 J3QR06 171 aa16.65■□□□□ 0.26
ATG4D-204ENST00000586417 TOR1AO14656 332 aa16.65■□□□□ 0.26
ATG4D-204ENST00000586417 CLEC9AQ6UXN8 241 aa16.65■□□□□ 0.26
ATG4D-204ENST00000586417 PCNPQ8WW12 178 aaKnown RBP16.65■□□□□ 0.26
ATG4D-204ENST00000586417 PHYHIPLQ96FC7 376 aa16.65■□□□□ 0.26
ATG4D-204ENST00000586417 SESN1Q9Y6P5 492 aa16.65■□□□□ 0.26
ATG4D-204ENST00000586417 ABCA2Q9BZC7 2435 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 PPIAL4CA0A0B4J2A2 164 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 IGSF23A1L1A6 192 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 FAM24AA6NFZ4 105 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 FAM90A26D6RGX4 464 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 WRBO00258 174 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 CT45A6P0DMU7 189 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 CT45A5P0DMU8 189 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 CT45A7P0DMV0 189 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 PPIAL4GP0DN37 164 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 CLDND2Q8NHS1 167 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 TMEM133Q9H2Q1 129 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 MYO9AB2RTY4 2548 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 IGHV4-61A0A0C4DH41 118 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 SYNGR2O43760 224 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 RBP4P02753 201 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 TPT1P13693 172 aaKnown RBP16.64■□□□□ 0.25
ATG4D-204ENST00000586417 DSCR9P59020 149 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 VAMP2P63027 116 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 EWSR1Q01844 656 aaKnown RBP eCLIP16.64■□□□□ 0.25
ATG4D-204ENST00000586417 RPL7L1Q6DKI1 246 aaKnown RBP16.64■□□□□ 0.25
ATG4D-204ENST00000586417 H2BFWTQ7Z2G1 175 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 OR4S2Q8NH73 311 aa16.64■□□□□ 0.25
ATG4D-204ENST00000586417 ZNF469Q96JG9 3925 aaPredicted RBP16.63■□□□□ 0.25
ATG4D-204ENST00000586417 CAV2P51636 162 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 LMO4P61968 165 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 NHLH2Q02577 135 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 BAP18Q8IXM2 172 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 TMEM252Q8N6L7 170 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 OR9G1Q8NH87 305 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 RAB40CQ96S21 281 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 SMIM3Q9BZL3 60 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 HSPB7Q9UBY9 170 aa16.63■□□□□ 0.25
ATG4D-204ENST00000586417 TEX15Q9BXT5 2789 aa16.62■□□□□ 0.25
ATG4D-204ENST00000586417 GAPDHP04406 335 aaKnown RBP16.62■□□□□ 0.25
ATG4D-204ENST00000586417 ZNF137PP52743 207 aa16.62■□□□□ 0.25
ATG4D-204ENST00000586417 GNB2P62879 340 aa16.62■□□□□ 0.25
ATG4D-204ENST00000586417 TNFRSF9Q07011 255 aa16.62■□□□□ 0.25
ATG4D-204ENST00000586417 ABHD12Q8N2K0 398 aa16.62■□□□□ 0.25
ATG4D-204ENST00000586417 ST6GALNAC6Q969X2 333 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms