RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	C11orf88	Q6PI97	169 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	SGPP2	Q8IWX5	399 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	SPAG16	Q8N0X2	631 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318		Q8N6K4	173 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	OR4S2	Q8NH73	311 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	ZFAND2B	Q8WV99	257 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	FLYWCH2	Q96CP2	140 aa	Known RBP	13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	EAF1	Q96JC9	268 aa	Predicted RBP	13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	RNF5	Q99942	180 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	NUDT15	Q9NV35	164 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	PITPNC1	Q9UKF7	332 aa		13.35	□□□□□ -0.27
TCF3-208	ENST00000586318	TRAV6	A0A075B6T7	132 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	IGKV1-16	P04430	117 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	H2AFB2	P0C5Z0	115 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	TMEM11	P17152	192 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	MECP2	P51608	486 aa	Known RBP	13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	HILS1	P60008	231 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	RGS21	Q2M5E4	152 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	FBLN7	Q53RD9	439 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	TMEM177	Q53S58	311 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	PLET1	Q6UQ28	207 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	OR4C13	Q8NGP0	309 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	GALNT14	Q96FL9	552 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	TP53RK	Q96S44	253 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	ALX4	Q9H161	411 aa	Predicted RBP	13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	VPREB3	Q9UKI3	123 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318	KCNIP3	Q9Y2W7	256 aa		13.34	□□□□□ -0.27
TCF3-208	ENST00000586318		A0A0A6YYJ9	748 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	DNAJC9-AS1	A6NH13	148 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	CLDN34	H7C241	214 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	RAMP3	O60896	148 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	CRYZL1	O95825	349 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	ANXA7	P20073	488 aa	Known RBP	13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	SLC9A3R2	Q15599	337 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	LY6E	Q16553	131 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	ZNF585B	Q52M93	769 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	LIAT1	Q6ZQX7	453 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	OSR1	Q8TAX0	266 aa	Predicted RBP	13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	RBMXL1	Q96E39	390 aa	Known RBP	13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	JMJD8	Q96S16	334 aa		13.33	□□□□□ -0.28
TCF3-208	ENST00000586318	OR2F2	O95006	317 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	HPRT1	P00492	218 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	OR5AC1	P0C628	307 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	VSIG10L2	P0DP72	767 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	SPN	P16150	400 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	UCP1	P25874	307 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	LPAR6	P43657	344 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	LGALS7	P47929	136 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	RAG2	P55895	527 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	RPS16	P62249	146 aa	Known RBP	13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	SUPT4H1	P63272	117 aa	Known RBP	13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	PPP1R1A	Q13522	171 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	HNF4G	Q14541	408 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	C16orf82	Q7Z2V1	217 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	OR8H1	Q8NGG4	311 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	RITA1	Q96K30	269 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	HARBI1	Q96MB7	349 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	RBM14	Q96PK6	669 aa	Known RBP	13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	MARVELD1	Q9BSK0	173 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	PLEKHA2	Q9HB19	425 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	ESM1	Q9NQ30	184 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	COMMD9	Q9P000	198 aa		13.32	□□□□□ -0.28
TCF3-208	ENST00000586318	SHOX	O15266	292 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	PEX14	O75381	377 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	SFT2D2	O95562	160 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	SERPINE2	P07093	398 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	OR4E1	P0C645	316 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	ANXA3	P12429	323 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	RPA2	P15927	270 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	VAMP1	P23763	118 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	SP6	Q3SY56	376 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	TMEM219	Q86XT9	240 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	GLYATL2	Q8WU03	294 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	TSNAX	Q99598	290 aa	Known RBP	13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	SLC25A33	Q9BSK2	321 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	CHIA	Q9BZP6	476 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	TMEM222	Q9H0R3	208 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	TNFRSF19	Q9NS68	423 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	C1RL	Q9NZP8	487 aa		13.31	□□□□□ -0.28
TCF3-208	ENST00000586318	INMT-MINDY4	F8WBC2	141 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	NBR2	O15453	112 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	TCF21	O43680	179 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	S1PR2	O95136	353 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	NDUFA3	O95167	84 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	SPDEF	O95238	335 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	HRAS	P01112	189 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	IFNA2	P01563	188 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	TMEM187	Q14656	261 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	MMD	Q15546	238 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	TRIM16L	Q309B1	348 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	C4orf46	Q504U0	113 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	LYG2	Q86SG7	212 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	NPB	Q8NG41	125 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	DUX5	Q96PT3	197 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	AIFM2	Q9BRQ8	373 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	BEX1	Q9HBH7	125 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	RAB18	Q9NP72	206 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	PLSCR3	Q9NRY6	295 aa		13.3	□□□□□ -0.28
TCF3-208	ENST00000586318	MOB4	Q9Y3A3	225 aa		13.3	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms