RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 OR4C13Q8NGP0 309 aa14.71□□□□□ -0.05
RFFL-211ENST00000584541 TMEM230Q96A57 120 aa14.71□□□□□ -0.05
RFFL-211ENST00000584541 FLYWCH2Q96CP2 140 aaKnown RBP14.71□□□□□ -0.05
RFFL-211ENST00000584541 SONP18583 2426 aaKnown RBP14.7□□□□□ -0.06
RFFL-211ENST00000584541 RBFOX2O43251 390 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■□□□ 13
RFFL-211ENST00000584541 CRYZL1O95825 349 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 SERPINE2P07093 398 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 TMEM11P17152 192 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 CD24P25063 80 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 RAG2P55895 527 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 DHODHQ02127 395 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 TUSC1Q2TAM9 212 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 TRIM16LQ309B1 348 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 C4orf46Q504U0 113 aa14.7□□□□□ -0.06
RFFL-211ENST00000584541 CCBE1Q6UXH8 406 aaPredicted RBP14.7□□□□□ -0.06
RFFL-211ENST00000584541 ALX4Q9H161 411 aaPredicted RBP14.7□□□□□ -0.06
RFFL-211ENST00000584541 INMT-MINDY4F8WBC2 141 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 SHOXO15266 292 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 HOXA3O43365 443 aaPredicted RBP14.69□□□□□ -0.06
RFFL-211ENST00000584541 DHFRP00374 187 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 IFNA2P01563 188 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 IGHV4-59P01825 116 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 OR5AC1P0C628 307 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 OR4E1P0C645 316 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 RAB25P57735 213 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 RPS16P62249 146 aaKnown RBP14.69□□□□□ -0.06
RFFL-211ENST00000584541 EBI3Q14213 229 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 TMEM86BQ8N661 226 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 MINDY2Q8NBR6 621 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 OSR1Q8TAX0 266 aaPredicted RBP14.69□□□□□ -0.06
RFFL-211ENST00000584541 GALNT14Q96FL9 552 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 EAF1Q96JC9 268 aaPredicted RBP14.69□□□□□ -0.06
RFFL-211ENST00000584541 TP53RKQ96S44 253 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 RNF5Q99942 180 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 AIFM2Q9BRQ8 373 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 MARVELD1Q9BSK0 173 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 BEX1Q9HBH7 125 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 TCF19Q9Y242 345 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 POMT1Q9Y6A1 747 aa14.69□□□□□ -0.06
RFFL-211ENST00000584541 PIGBOS1A0A0B4J2F0 54 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 RAMP3O60896 148 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 HPRT1P00492 218 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 HLA-AP01891 365 aaKnown RBP14.68□□□□□ -0.06
RFFL-211ENST00000584541 IGKV1-16P04430 117 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 RPA2P15927 270 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 SPNP16150 400 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 LPAR6P43657 344 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 MECP2P51608 486 aaKnown RBP14.68□□□□□ -0.06
RFFL-211ENST00000584541 PPP1R1AQ13522 171 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 HNF4GQ14541 408 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 SLC9A3R2Q15599 337 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 SP6Q3SY56 376 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 TMEM177Q53S58 311 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 PIFOQ8TCI5 191 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 HARBI1Q96MB7 349 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 JMJD8Q96S16 334 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 TSNAXQ99598 290 aaKnown RBP14.68□□□□□ -0.06
RFFL-211ENST00000584541 TMEM222Q9H0R3 208 aa14.68□□□□□ -0.06
RFFL-211ENST00000584541 PRAF2O60831 178 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 ATG12O94817 140 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 SFT2D2O95562 160 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 HRASP01112 189 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 UCP1P25874 307 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 LGALS7P47929 136 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 BRWD1-AS2P59051 145 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 SUPT4H1P63272 117 aaKnown RBP14.67□□□□□ -0.06
RFFL-211ENST00000584541 SRPXP78539 464 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 LY6EQ16553 131 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 LIAT1Q6ZQX7 453 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 LYG2Q86SG7 212 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 OR8H1Q8NGG4 311 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 PLEKHA2Q9HB19 425 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 GPN1Q9HCN4 374 aaPredicted RBP14.67□□□□□ -0.06
RFFL-211ENST00000584541 TNFRSF19Q9NS68 423 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 C1RLQ9NZP8 487 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 COMMD9Q9P000 198 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 KIAA1456Q9P272 454 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 VPREB3Q9UKI3 123 aa14.67□□□□□ -0.06
RFFL-211ENST00000584541 C9orf170A2RU37 121 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 A6NDX4 124 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 IL5P05113 134 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 VSIG10L2P0DP72 767 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 ERVK-16P61578 105 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 DHRS2Q13268 280 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 OXA1LQ15070 435 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 MMDQ15546 238 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 ZNF585BQ52M93 769 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 C16orf82Q7Z2V1 217 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 ZNF695Q8IW36 515 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 CASTOR1Q8WTX7 329 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 GLYATL2Q8WU03 294 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 SLC25A33Q9BSK2 321 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 MTORP42345 2549 aa14.66□□□□□ -0.06
RFFL-211ENST00000584541 OR2F2O95006 317 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 S1PR2O95136 353 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 NQO2P16083 231 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 TMEM187Q14656 261 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 TMEM219Q86XT9 240 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 LGI3Q8N145 548 aa14.65□□□□□ -0.06
RFFL-211ENST00000584541 Q8N6K4 173 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms