RNA–Protein interactions for RNA: ENST00000583649.1

CASC3-208, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-208ENST00000583649 SETD9Q8NE22 299 aa8.19□□□□□ -1.1
CASC3-208ENST00000583649 SETD6Q8TBK2 473 aa8.19□□□□□ -1.1
CASC3-208ENST00000583649 SRSF12Q8WXF0 261 aaKnown RBP8.19□□□□□ -1.1
CASC3-208ENST00000583649 EEF1AKMT3Q96AZ1 226 aa8.19□□□□□ -1.1
CASC3-208ENST00000583649 OR14A2Q96R54 314 aa8.19□□□□□ -1.1
CASC3-208ENST00000583649 THTPAQ9BU02 230 aa8.19□□□□□ -1.1
CASC3-208ENST00000583649 RNF126Q9BV68 326 aa8.19□□□□□ -1.1
CASC3-208ENST00000583649 FAM107BQ9H098 131 aa8.19□□□□□ -1.1
CASC3-208ENST00000583649 RIMS4Q9H426 269 aaPredicted RBP8.19□□□□□ -1.1
CASC3-208ENST00000583649 ZNF257Q9Y2Q1 563 aa8.19□□□□□ -1.1
CASC3-208ENST00000583649 M0R1X1 148 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 BAG2O95816 211 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 IFNA21P01568 189 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 IFNA17P01571 189 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 PRH1P02810 166 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 FCGR2BP31994 310 aaPredicted RBP8.18□□□□□ -1.1
CASC3-208ENST00000583649 CLEC19AQ6UXS0 136 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 TTC9CQ8N5M4 171 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 ZNF383Q8NA42 475 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 OR5B3Q8NH48 314 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 AGMATQ9BSE5 352 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 SELENOKQ9Y6D0 94 aa8.18□□□□□ -1.1
CASC3-208ENST00000583649 TRBV7-1A0A0A6YYK4 115 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 J3QRE1 110 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 CRYGBP07316 175 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 EDN2P20800 178 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 SSBP2P81877 361 aaPredicted RBP8.17□□□□□ -1.1
CASC3-208ENST00000583649 TMEM187Q14656 261 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 PRSS8Q16651 343 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 KDM4DQ6B0I6 523 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 LHFPL3Q86UP9 236 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 UBE2DNLQ8IWF7 75 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 CDH26Q8IXH8 852 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 CD300LFQ8TDQ1 290 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 MUL1Q969V5 352 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 PTX4Q96A99 478 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 CXorf58Q96LI9 332 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 NDUFAF3Q9BU61 184 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 C11orf54Q9H0W9 315 aaPredicted RBP8.17□□□□□ -1.1
CASC3-208ENST00000583649 BANF2Q9H503 90 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 ISG20L2Q9H9L3 353 aaKnown RBP8.17□□□□□ -1.1
CASC3-208ENST00000583649 SCRT2Q9NQ03 307 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 GHRLQ9UBU3 117 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 FAT2Q9NYQ8 4349 aa8.17□□□□□ -1.1
CASC3-208ENST00000583649 MRPS14O60783 128 aaKnown RBP8.16□□□□□ -1.1
CASC3-208ENST00000583649 RBMXL2O75526 392 aaKnown RBP8.16□□□□□ -1.1
CASC3-208ENST00000583649 IGLV2-23P01705 113 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 C8orf88P0DMB2 117 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 HIST1H1BP16401 226 aaKnown RBP8.16□□□□□ -1.1
CASC3-208ENST00000583649 UBE2KP61086 200 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 FLOT2Q14254 428 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 CCDC58Q4VC31 144 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 LIPKQ5VXJ0 399 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 RPL22L1Q6P5R6 122 aaKnown RBP8.16□□□□□ -1.1
CASC3-208ENST00000583649 ZNF645Q8N7E2 425 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 Q96M66 194 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 EXOGQ9Y2C4 368 aaKnown RBP8.16□□□□□ -1.1
CASC3-208ENST00000583649 DNAH6Q9C0G6 4158 aa8.16□□□□□ -1.1
CASC3-208ENST00000583649 DNAH11Q96DT5 4516 aa8.15□□□□□ -1.1
CASC3-208ENST00000583649 DNAH2Q9P225 4427 aa8.15□□□□□ -1.1
CASC3-208ENST00000583649 DEFA4P12838 97 aa8.15□□□□□ -1.1
CASC3-208ENST00000583649 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.1
CASC3-208ENST00000583649 MMD2Q8IY49 270 aa8.15□□□□□ -1.1
CASC3-208ENST00000583649 SVOPQ8N4V2 548 aa8.15□□□□□ -1.1
CASC3-208ENST00000583649 ADTRPQ96IZ2 230 aa8.15□□□□□ -1.1
CASC3-208ENST00000583649 ARL2BPQ9Y2Y0 163 aa8.15□□□□□ -1.1
CASC3-208ENST00000583649 DYNC1H1Q14204 4646 aaKnown RBP8.14□□□□□ -1.11
CASC3-208ENST00000583649 DEFB4AO15263 64 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 CYB5BO43169 146 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 CA1P00915 261 aaPredicted RBP8.14□□□□□ -1.11
CASC3-208ENST00000583649 AMBPP02760 352 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 CALB2P22676 271 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 HLA-DMBP28068 263 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 PSMB6P28072 239 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 SERPINB10P48595 397 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 ODF3L2Q3SX64 289 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 TMEM41BQ5BJD5 291 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 PLET1Q6UQ28 207 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 OSR1Q8TAX0 266 aaPredicted RBP8.14□□□□□ -1.11
CASC3-208ENST00000583649 Q96MT0 163 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 CMTM3Q96MX0 182 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 CIB1Q99828 191 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 FAAP24Q9BTP7 215 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 GABARAPL3Q9BY60 117 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 DAZ1Q9NQZ3 744 aaKnown RBP8.14□□□□□ -1.11
CASC3-208ENST00000583649 THYN1Q9P016 225 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 ORC6Q9Y5N6 252 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 DMRT1Q9Y5R6 373 aa8.14□□□□□ -1.11
CASC3-208ENST00000583649 NPIPB5A8MRT5 1133 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 IGHV3-23P01764 117 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 CLEC3BP05452 202 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 UBBP0CG47 229 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 MIFP14174 115 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 NPY1RP25929 384 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 SIGIRRQ6IA17 410 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 TMPRSS11AQ6ZMR5 421 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 C5orf24Q7Z6I8 188 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 NKAIN3Q8N8D7 197 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 CCDC140Q96MF4 163 aa8.13□□□□□ -1.11
CASC3-208ENST00000583649 UQCC2Q9BRT2 126 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms