RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 CHST5Q9GZS9 411 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 TOLLIPQ9H0E2 274 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 TCEAL2Q9H3H9 227 aaPredicted RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 SPACA1Q9HBV2 294 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 WFDC1Q9HC57 220 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 KCNJ16Q9NPI9 418 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 SDHAF3Q9NRP4 125 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 C19orf12Q9NSK7 152 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 GSKIPQ9P0R6 139 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 NPIPA1Q9UND3 350 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 C14orf166Q9Y224 244 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 CHTOPQ9Y3Y2 248 aaKnown RBP3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 LHFPL6Q9Y693 200 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 LRP4O75096 1905 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 DOCK9Q9BZ29 2069 aa3.08□□□□□ -1.92
SMCHD1-208ENST00000583344 COL5A1P20908 1838 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 HEATR5AQ86XA9 2040 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 FANCMQ8IYD8 2048 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 SCN2AQ99250 2005 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 TRAV1-1A0A0B4J248 108 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 PPIAL4CA0A0B4J2A2 164 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 IGHV5-51A0A0C4DH38 117 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 RBFOX3A6NFN3 312 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 TLCD2A6NGC4 264 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 VSTM2BA6NLU5 285 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 LRRC30A6NM36 301 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF726A6NNF4 738 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF724A8MTY0 619 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 SEC14L6B5MCN3 397 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 SDCBPO00560 298 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 HSD17B6O14756 317 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 SH2D1BO14796 132 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 PHF1O43189 567 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 CDS2O95674 445 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 SEMA4FO95754 770 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 NUDT14O95848 222 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 IFNA10P01566 189 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 IGHG1P01857 330 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 SRP19P09132 144 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 PPIAL4GP0DN37 164 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 FOLR1P15328 257 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 NQO2P16083 231 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF43P17038 809 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 RPL35AP18077 110 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 GABRG2P18507 467 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 UCP1P25874 307 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 OTX1P32242 354 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 GPX4P36969 197 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 CEACAM6P40199 344 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 OR3A4PP47883 348 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 CSNK1A1P48729 337 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 SULT1A1P50225 295 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 EFNA3P52797 238 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 BIDP55957 195 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 FBXW4P57775 412 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 RAB2AP61019 212 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 FMODQ06828 376 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 PLCXD2Q0VAA5 305 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 KLF5Q13887 457 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 RSPO1Q2MKA7 263 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 TMEM176BQ3YBM2 270 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 ACSF3Q4G176 576 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 HIKESHIQ53FT3 197 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 PRAMEF5Q5TYX0 476 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 C1orf189Q5VU69 101 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 PRAMEF6Q5VXH4 476 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 OTPQ5XKR4 325 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 DPPA3Q6W0C5 159 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 Q6ZS49 121 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 PRR22Q8IZ63 422 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 LGI3Q8N145 548 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 LRRC75A-AS1Q8N1F1 130 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 NFAM1Q8NET5 270 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 OR8B12Q8NGG6 310 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 OR5D13Q8NGL4 314 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 OR4D5Q8NGN0 318 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 SLC22A8Q8TCC7 542 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 MRPL24Q96A35 216 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 MUCL1Q96DR8 90 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 CPNE2Q96FN4 548 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 CITED1Q99966 193 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 ZNF2Q9BSG1 426 aaPredicted RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 OR11A1Q9GZK7 315 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 EIF5A2Q9GZV4 153 aaKnown RBP3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 BANF2Q9H503 90 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 NAA60Q9H7X0 242 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 LPAR2Q9HBW0 351 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 GPR84Q9NQS5 396 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 NECAP2Q9NVZ3 263 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 EHFQ9NZC4 300 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 ANXA10Q9UJ72 324 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 MMP17Q9ULZ9 603 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 FZR1Q9UM11 496 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 HDGFL3Q9Y3E1 203 aa3.07□□□□□ -1.92
SMCHD1-208ENST00000583344 IGLV3-12A0A075B6K2 115 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 IGKV1D-8A0A087WSZ0 117 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 DUXBA0A1W2PPF3 345 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 H3BQ15 152 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 M0R036 132 aa3.06□□□□□ -1.92
SMCHD1-208ENST00000583344 AGPAT2O15120 278 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms