RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 ERVK-16P61578 105 aa18.7■□□□□ 0.58
CCDC47-204ENST00000582252 NCR3LG1Q68D85 454 aa18.7■□□□□ 0.58
CCDC47-204ENST00000582252 TGIF2LYQ8IUE0 185 aa18.7■□□□□ 0.58
CCDC47-204ENST00000582252 ZCCHC24Q8N2G6 241 aaKnown RBP18.7■□□□□ 0.58
CCDC47-204ENST00000582252 SUN5Q8TC36 379 aa18.7■□□□□ 0.58
CCDC47-204ENST00000582252 CCL17Q92583 94 aa18.7■□□□□ 0.58
CCDC47-204ENST00000582252 SCO1O75880 301 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 SCAF4O95104 1147 aaKnown RBP18.69■□□□□ 0.58
CCDC47-204ENST00000582252 THBS3P49746 956 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 RBMXL2O75526 392 aaKnown RBP18.69■□□□□ 0.58
CCDC47-204ENST00000582252 NFYBP25208 207 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 ZNF134P52741 427 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 SPANXN5Q5MJ07 72 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 TCF23Q7RTU1 214 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 LILRB2Q8N423 598 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 LFNGQ8NES3 379 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 OR4S2Q8NH73 311 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 SCGB1C1Q8TD33 95 aa18.69■□□□□ 0.58
CCDC47-204ENST00000582252 NDUFB3O43676 98 aa18.68■□□□□ 0.58
CCDC47-204ENST00000582252 NDUFA2O43678 99 aa18.68■□□□□ 0.58
CCDC47-204ENST00000582252 RPL39P5Q59GN2 51 aa18.68■□□□□ 0.58
CCDC47-204ENST00000582252 LRRC10Q5BKY1 277 aa18.68■□□□□ 0.58
CCDC47-204ENST00000582252 CT45A1Q5HYN5 189 aa18.68■□□□□ 0.58
CCDC47-204ENST00000582252 CT45A3Q8NHU0 189 aa18.68■□□□□ 0.58
CCDC47-204ENST00000582252 NEUROG1Q92886 237 aa18.68■□□□□ 0.58
CCDC47-204ENST00000582252 CISD1Q9NZ45 108 aaKnown RBP18.68■□□□□ 0.58
CCDC47-204ENST00000582252 RPUSD1Q9UJJ7 312 aaKnown RBP18.68■□□□□ 0.58
CCDC47-204ENST00000582252 LRRK2Q5S007 2527 aa18.68■□□□□ 0.58
CCDC47-204ENST00000582252 PROP1O75360 226 aa18.67■□□□□ 0.58
CCDC47-204ENST00000582252 METTL15P1P0C7V9 234 aa18.67■□□□□ 0.58
CCDC47-204ENST00000582252 DEFA5Q01523 94 aa18.67■□□□□ 0.58
CCDC47-204ENST00000582252 DPPA3Q6W0C5 159 aa18.67■□□□□ 0.58
CCDC47-204ENST00000582252 RAB39BQ96DA2 213 aa18.67■□□□□ 0.58
CCDC47-204ENST00000582252 UQCC1Q9NVA1 299 aa18.67■□□□□ 0.58
CCDC47-204ENST00000582252 SLC31A2O15432 143 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 DAOP14920 347 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 NQO2P16083 231 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 DVL1P1P54792 670 aaPredicted RBP18.66■□□□□ 0.58
CCDC47-204ENST00000582252 RPL31P62899 125 aaKnown RBP18.66■□□□□ 0.58
CCDC47-204ENST00000582252 AKR1C8PQ5T2L2 129 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 ZNF439Q8NDP4 499 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 FAM213BQ8TBF2 198 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 DTD1Q8TEA8 209 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 PARD6GQ9BYG4 376 aaPredicted RBP18.66■□□□□ 0.58
CCDC47-204ENST00000582252 IGHV1-69-2A0A0G2JMI3 117 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 F8W036 122 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 RNASEK-C17orf49H0YIS7 233 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 OR8U8P0C7N1 319 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 MRPS11P82912 194 aaKnown RBP18.66■□□□□ 0.58
CCDC47-204ENST00000582252 AKR1C1Q04828 323 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 ATP6V1FQ16864 119 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 PRAMEF5Q5TYX0 476 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 TMEM14EPQ6UXP3 125 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 SVBPQ8N300 66 aa18.66■□□□□ 0.58
CCDC47-204ENST00000582252 SAA2-SAA4A0A096LPE2 208 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 SAA2P0DJI9 122 aaPredicted RBP18.65■□□□□ 0.58
CCDC47-204ENST00000582252 SNCAP37840 140 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 LYG1Q8N1E2 194 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 ZNF525Q8N782 197 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 OR4A16Q8NH70 328 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 DDB2Q92466 427 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 ZNF714Q96N38 554 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 CLCC1Q96S66 551 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 SEC11CQ9BY50 192 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 KAAG1Q9UBP8 84 aa18.65■□□□□ 0.58
CCDC47-204ENST00000582252 CEBPZOSA8MTT3 80 aa18.64■□□□□ 0.57
CCDC47-204ENST00000582252 IGHV3-7P01780 117 aa18.64■□□□□ 0.57
CCDC47-204ENST00000582252 PEA15Q15121 130 aa18.64■□□□□ 0.57
CCDC47-204ENST00000582252 HFEQ30201 348 aa18.64■□□□□ 0.57
CCDC47-204ENST00000582252 C10orf91Q5T1B1 145 aa18.64■□□□□ 0.57
CCDC47-204ENST00000582252 SLC25A48Q6ZT89 311 aaKnown RBP18.64■□□□□ 0.57
CCDC47-204ENST00000582252 LEAP2Q969E1 77 aa18.64■□□□□ 0.57
CCDC47-204ENST00000582252 PBDC1Q9BVG4 233 aa18.64■□□□□ 0.57
CCDC47-204ENST00000582252 CARHSP1Q9Y2V2 147 aaKnown RBP18.64■□□□□ 0.57
CCDC47-204ENST00000582252 BTBD17A6NE02 478 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 TNFRSF13BO14836 293 aaPredicted RBP18.63■□□□□ 0.57
CCDC47-204ENST00000582252 AGPAT2O15120 278 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 SIAH2O43255 324 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 CD5P06127 495 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 LINC00205P59089 165 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 RAB2AP61019 212 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 SLC38A11Q08AI6 406 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 ZNF672Q499Z4 452 aaPredicted RBP18.63■□□□□ 0.57
CCDC47-204ENST00000582252 AARDQ4LEZ3 155 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 MUC15Q8N387 334 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 PSMG3Q9BT73 122 aaPredicted RBP18.63■□□□□ 0.57
CCDC47-204ENST00000582252 USF3Q68DE3 2245 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 IGFBP2P18065 325 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 RPP30P78346 268 aaKnown RBP18.63■□□□□ 0.57
CCDC47-204ENST00000582252 SRSF3P84103 164 aaKnown RBP18.63■□□□□ 0.57
CCDC47-204ENST00000582252 HEPN1Q6WQI6 88 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 OR52E5Q8NH55 327 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 PINX1Q96BK5 328 aaKnown RBP18.63■□□□□ 0.57
CCDC47-204ENST00000582252 TMEM231Q9H6L2 316 aa18.63■□□□□ 0.57
CCDC47-204ENST00000582252 PLAUP00749 431 aa18.62■□□□□ 0.57
CCDC47-204ENST00000582252 GNG10P50151 68 aa18.62■□□□□ 0.57
CCDC47-204ENST00000582252 TLE4Q04727 773 aa18.62■□□□□ 0.57
CCDC47-204ENST00000582252 THNSL2Q86YJ6 484 aa18.62■□□□□ 0.57
CCDC47-204ENST00000582252 TMEM204Q9BSN7 226 aa18.62■□□□□ 0.57
CCDC47-204ENST00000582252 ARFGEF3Q5TH69 2177 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms