RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SPATA31B1PQ5VZV4 182 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 COA5Q86WW8 74 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 FUNDC1Q8IVP5 155 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 TMEM251Q8N6I4 163 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 OR2D3Q8NGH3 330 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 OR10A6Q8NH74 314 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 TNFAIP8L1Q8WVP5 186 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 RNF133Q8WVZ7 376 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 ASB13Q8WXK3 278 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 CPNE2Q96FN4 548 aaPredicted RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC35G5Q96KT7 338 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 KCTD7Q96MP8 289 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 MBOAT7Q96N66 472 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 MED18Q9BUE0 208 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 ZNF471Q9BX82 626 aaPredicted RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 UPF3BQ9BZI7 483 aaKnown RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 OR51I2Q9H344 312 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 HES4Q9HCC6 221 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 NRBP2Q9NSY0 501 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 PARVAQ9NVD7 372 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 FGFR1OP2Q9NVK5 253 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 PLEKHJ1Q9NW61 149 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 EURLQ9NYK6 297 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 PRO2289Q9P1D8 64 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 RPL26L1Q9UNX3 145 aaKnown RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 POLR1DQ9Y2S0 133 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 KIF1BO60333 1816 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 DOCK3Q8IZD9 2030 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 DENND4BO75064 1496 aaPredicted RBP0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 NUMA1Q14980 2115 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 MED12LQ86YW9 2145 aa0.58□□□□□ -2.32
SMCHD1-206ENST00000581631 MAST2Q6P0Q8 1798 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 NCOA1Q15788 1441 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 BRWD1Q9NSI6 2320 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 C5orf49A4QMS7 147 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 A8MUN3 132 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 DISC1C4P0D8 188 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 GOLGA6L19H0YKK7 550 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 KCNK1O00180 336 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC17A3O00476 420 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 UBFD1O14562 309 aaKnown RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 PFDN6O15212 129 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 ACOX3O15254 700 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 BIRC5O15392 142 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 COCHO43405 550 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 ARL6IP5O75915 188 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 DCTN3O75935 186 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 NDUFB2O95178 105 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 DEXIO95424 95 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 MT-CO2P00403 227 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 IGLV3-27P01718 113 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 ISG15P05161 165 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 OR13C7P0DN81 318 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC25A16P16260 332 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 NPPCP23582 126 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 CDK2P24941 298 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 GRPRP30550 384 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 OR10J1P30954 320 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 IFNGR2P38484 337 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 CD200P41217 278 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 CDK9P50750 372 aaKnown RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 CEBPGP53567 150 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 TAS2R45P59539 299 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 FGF12P61328 243 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 RPS24P62847 133 aaKnown RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 FABP5Q01469 135 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 CAV1Q03135 178 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 PLPPR5Q32ZL2 321 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 CST9Q5W186 159 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 LPCAT4Q643R3 524 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 C5orf46Q6UWT4 87 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 LRRN1Q6UXK5 716 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC51BQ86UW2 128 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 BOD1L2Q8IYS8 172 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 SLC35F6Q8N357 371 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 GPR32P1Q8NGA4 272 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 OR10D3Q8NH80 312 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 DNAJB3Q8WWF6 145 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 MRPS24Q96EL2 167 aaKnown RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 ACY3Q96HD9 319 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 ABHD14BQ96IU4 210 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 LLPHQ9BRT6 129 aaKnown RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 TIPINQ9BVW5 301 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 CDCA4Q9BXL8 241 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 GNB1LQ9BYB4 327 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 MROQ9BYG7 248 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 MRPS26Q9BYN8 205 aaKnown RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 NKX6-2Q9C056 277 aaPredicted RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 NSRP1Q9H0G5 558 aaKnown RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 MED28Q9H204 178 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 FKBP14Q9NWM8 211 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 C3orf18Q9UK00 162 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 DNAJC12Q9UKB3 198 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 HHLA2Q9UM44 414 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 POLR3HQ9Y535 204 aaPredicted RBP0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 MYH2Q9UKX2 1941 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 MED13Q9UHV7 2174 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 KDM5BQ9UGL1 1544 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 ECM29Q5VYK3 1845 aa0.57□□□□□ -2.32
SMCHD1-206ENST00000581631 VIRMAQ69YN4 1812 aaKnown RBP0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms