RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 SPRY2O43597 315 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 DEDDO75618 318 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 ACTL6BO94805 426 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 OR2C1O95371 312 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 HLA-AP01891 365 aaKnown RBP7.43□□□□□ -1.22
RFFL-208ENST00000581039 CD1AP06126 327 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 RRASP10301 218 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 EDN2P20800 178 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 BMI1P35226 326 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 MAP2K4P45985 399 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 UBE2KP61086 200 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 ZNF45Q02386 682 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 UNC119Q13432 240 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 TPBGQ13641 420 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 PRSS8Q16651 343 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 MRGPRG-AS1Q2M3A8 158 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 C15orf32Q32M92 178 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 C1orf100Q5SVJ3 147 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 TTC23Q5W5X9 447 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 ZFP1Q6P2D0 407 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 WFDC3Q8IUB2 231 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 ZNF485Q8NCK3 441 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 SRSF12Q8WXF0 261 aaKnown RBP7.43□□□□□ -1.22
RFFL-208ENST00000581039 ACOT12Q8WYK0 555 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 GGHQ92820 318 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 SPIN2AQ99865 258 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 SPIN2BQ9BPZ2 258 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 URM1Q9BTM9 101 aaKnown RBP7.43□□□□□ -1.22
RFFL-208ENST00000581039 C12orf4Q9NQ89 552 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 SDHAF2Q9NX18 166 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 SELENOKQ9Y6D0 94 aa7.43□□□□□ -1.22
RFFL-208ENST00000581039 IGKV1-6A0A0C4DH72 117 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 ZNF320A2RRD8 509 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 TMEM14DPA8MWL7 114 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 TRDCB7Z8K6 153 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 SOCS1O15524 211 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 OR2J3O76001 311 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 BPNT1O95861 308 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 SRMP19623 302 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 SERPINB10P48595 397 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 EWSR1Q01844 656 aaKnown RBP eCLIP7.42□□□□□ -1.22
RFFL-208ENST00000581039 ST3GAL4Q11206 333 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 FAM106AQ4KMX7 169 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 TM4SF20Q53R12 229 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 LGALS9CQ6DKI2 356 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 IDO2Q6ZQW0 420 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 Q6ZWC4 215 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 GPHB5Q86YW7 130 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 TMEM61Q8N0U2 210 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 TTC9CQ8N5M4 171 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 TMEM217Q8N7C4 229 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 CMSS1Q9BQ75 279 aaKnown RBP7.42□□□□□ -1.22
RFFL-208ENST00000581039 OR2D2Q9H210 308 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 KCNK15Q9H427 330 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 TP53TG1Q9Y2A0 90 aa7.42□□□□□ -1.22
RFFL-208ENST00000581039 A0A0A6YYD4 124 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 EFCAB10A6NFE3 127 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 CREBL2O60519 120 aaPredicted RBP7.41□□□□□ -1.22
RFFL-208ENST00000581039 SCAF4O95104 1147 aaKnown RBP7.41□□□□□ -1.22
RFFL-208ENST00000581039 ATF4P18848 351 aaPredicted RBP7.41□□□□□ -1.22
RFFL-208ENST00000581039 APOC4P55056 127 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 QRFPP83859 136 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 ACSM3Q53FZ2 586 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 RBM48Q5RL73 367 aaKnown RBP7.41□□□□□ -1.22
RFFL-208ENST00000581039 RBPMS2Q6ZRY4 209 aaKnown RBP7.41□□□□□ -1.22
RFFL-208ENST00000581039 LRRTM1Q86UE6 522 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 SLC25A42Q86VD7 318 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 C10orf67Q8IYJ2 551 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 FAM89BQ8N5H3 189 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 UXS1Q8NBZ7 420 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 OR4A4PQ8NGN8 299 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 OR10J5Q8NHC4 309 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 GATAD1Q8WUU5 269 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 CACNG8Q8WXS5 425 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 PHYHIPQ92561 330 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 LPAR5Q9H1C0 372 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 FBXL7Q9UJT9 491 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 HSF4Q9ULV5 492 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 RBM7Q9Y580 266 aaKnown RBP7.41□□□□□ -1.22
RFFL-208ENST00000581039 DMRT1Q9Y5R6 373 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 KIAA1109Q2LD37 5005 aa7.41□□□□□ -1.22
RFFL-208ENST00000581039 UBE2CO00762 179 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 MYL12BO14950 172 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 BET1O15155 118 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 FABP7O15540 132 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 CRYZL1O95825 349 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 ARL3P36405 182 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 TMEM50BP56557 158 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 WNT4P56705 351 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 MRPS15P82914 257 aaKnown RBP7.4□□□□□ -1.22
RFFL-208ENST00000581039 INSL4Q14641 139 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 DEFB135Q30KP9 77 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 OR4A47Q6IF82 309 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 MMD2Q8IY49 270 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 SLC38A6Q8IZM9 456 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 MS4A15Q8N5U1 240 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 OR6M1Q8NGM8 313 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 OR1L6Q8NGR2 347 aa7.4□□□□□ -1.22
RFFL-208ENST00000581039 OSR1Q8TAX0 266 aaPredicted RBP7.4□□□□□ -1.22
RFFL-208ENST00000581039 PHLDA1Q8WV24 401 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms