RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 OR4C12Q96R67 309 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 TINAGL1Q9GZM7 467 aaPredicted RBP11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 STUB1Q9UNE7 303 aa11.15□□□□□ -0.62
SMARCE1-213ENST00000578044 BET1O15155 118 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 SAP30O75446 220 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 IGLV1-51P01701 117 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 TRGV3P03979 118 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 GP9P14770 177 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 GNB3P16520 340 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 DUTP33316 252 aaKnown RBP11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 TALDO1P37837 337 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 SLURP1P55000 103 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 OR10A3P58181 314 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 KLF5Q13887 457 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 MSMO1Q15800 293 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 HACD4Q5VWC8 232 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 ZNF343Q6P1L6 599 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 OVCH2Q7RTZ1 564 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 CNBD2Q96M20 576 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 GINS4Q9BRT9 223 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
SMARCE1-213ENST00000578044 C13orf42A0A1B0GVH6 325 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 SHOXO15266 292 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 CNIH1O95406 144 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 HLA-DQB1P01920 261 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 PLA2G7Q13093 441 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 VMA21Q3ZAQ7 101 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 NR2C2APQ86WQ0 139 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 FAM103A1Q9BTL3 118 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 ALX4Q9H161 411 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 OR2W1Q9Y3N9 320 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 A3GALT2U3KPV4 340 aa11.13□□□□□ -0.63
SMARCE1-213ENST00000578044 A0A0A6YYH2 397 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 A6NJ64 397 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 SRRM4A7MD48 611 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 SPNP16150 400 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 LINC00205P59089 165 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 ARFRP1Q13795 201 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 PRSS8Q16651 343 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 MRGPRG-AS1Q2M3A8 158 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 CNIH2Q6PI25 160 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 ZNF645Q8N7E2 425 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 GRPEL2Q8TAA5 225 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 C5orf30Q96GV9 206 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 CLCC1Q96S66 551 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 Q9H521 79 aa11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 TXNL4BQ9NX01 149 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-213ENST00000578044 RYR3Q15413 4870 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 TRBV9A0A0B4J1U6 114 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 LY86O95711 162 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 FGF2P09038 288 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 CD36P16671 472 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 PJVKQ0ZLH3 352 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 TATDN3Q17R31 274 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 KLK9Q2XQG4 91 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 CDNFQ49AH0 187 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 C22orf42Q6IC83 251 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 SLC25A42Q86VD7 318 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 MMD2Q8IY49 270 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 SPARTQ8N0X7 666 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 ADAD2Q8NCV1 583 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 BVESQ8NE79 360 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 VSTM2AQ8TAG5 236 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 MS4A10Q96PG2 267 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 HSD17B10Q99714 261 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 ATG5Q9H1Y0 275 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 KLK9Q9UKQ9 250 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 PRELID3BQ9Y3B1 194 aa11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 RBM7Q9Y580 266 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-213ENST00000578044 LINC00473A8K010 186 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 H0Y980 276 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 AIREO43918 545 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 TUSC2O75896 110 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 OR2A4O95047 310 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 IGHV3-11P01762 117 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 OR9G9P0C7N8 305 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 CDK10Q15131 360 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 OR9G4Q8NGQ1 327 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 OR2K2Q8NGT1 345 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 SNAPC3Q92966 411 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 PEF1Q9UBV8 284 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 ZNF230Q9UIE0 474 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 SSR3Q9UNL2 185 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 MRPS7Q9Y2R9 242 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 ETV7Q9Y603 341 aa11.1□□□□□ -0.63
SMARCE1-213ENST00000578044 CRYZL1O95825 349 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 MAS1LP35410 378 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 DYRK1AQ13627 763 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 IL34Q6ZMJ4 242 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 ANKRD13BQ86YJ7 626 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 SBSPONQ8IVN8 264 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 Q8N1Y9 231 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 TTC9CQ8N5M4 171 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 OR5T1Q8NG75 326 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 CASTOR1Q8WTX7 329 aa11.09□□□□□ -0.63
SMARCE1-213ENST00000578044 SRSF12Q8WXF0 261 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms