RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 PSMD12O00232 456 aaPredicted RBP2.56□□□□□ -2
TRAPPC8-203ENST00000577474 UBFD1O14562 309 aaKnown RBP2.56□□□□□ -2
TRAPPC8-203ENST00000577474 UBE2L6O14933 153 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 ESDP10768 282 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 RANP62826 216 aaKnown RBP2.56□□□□□ -2
TRAPPC8-203ENST00000577474 KRTAP25-1Q3LHN0 102 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 GLT6D1Q7Z4J2 308 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 CALHM3Q86XJ0 350 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 SLC22A24Q8N4F4 322 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 OR11H1Q8NG94 326 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 ROPN1LQ96C74 230 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 OR8B2Q96RD0 313 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 OR52B2Q96RD2 323 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 TAAR3PQ9P1P4 343 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 MCTS1Q9ULC4 181 aaKnown RBP2.56□□□□□ -2
TRAPPC8-203ENST00000577474 ANGPT4Q9Y264 503 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 FLT4P35916 1363 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 PRR14LQ5THK1 2151 aa2.56□□□□□ -2
TRAPPC8-203ENST00000577474 TGIF2-C20orf24A0A0A6YYL0 155 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 CHP2O43745 196 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 NSA2O95478 260 aaKnown RBP2.55□□□□□ -2
TRAPPC8-203ENST00000577474 CDS2O95674 445 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 CRYGDP07320 174 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 TBPL1P62380 186 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 POLR2GP62487 172 aaKnown RBP eCLIP2.55□□□□□ -2
TRAPPC8-203ENST00000577474 HIST1H3AP68431 136 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 H3F3AP84243 136 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 GNA12Q03113 381 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 ACOT6Q3I5F7 207 aaPredicted RBP2.55□□□□□ -2
TRAPPC8-203ENST00000577474 DEFB134Q4QY38 66 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 TMEM97Q5BJF2 176 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 NOXRED1Q6NXP6 359 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 GPR179Q6PRD1 2367 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 LYPD6Q86Y78 171 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 TMEM86BQ8N661 226 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 LHFPL5Q8TAF8 219 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 ANKRD7Q92527 254 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 BTF3L4Q96K17 158 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 TRIM4Q9C037 500 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 TLNRD1Q9H1K6 362 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 TXNL4BQ9NX01 149 aaKnown RBP2.55□□□□□ -2
TRAPPC8-203ENST00000577474 GLTPQ9NZD2 209 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 FBXO5Q9UKT4 447 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 ANAPC10Q9UM13 185 aa2.55□□□□□ -2
TRAPPC8-203ENST00000577474 DSCAML1Q8TD84 2053 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 CHD2O14647 1828 aaKnown RBP2.54□□□□□ -2
TRAPPC8-203ENST00000577474 CEP170Q5SW79 1584 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 CRB1P82279 1406 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 NCOA1Q15788 1441 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 ADGRL3Q9HAR2 1447 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 IGHV3-73A0A0B4J1V6 119 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 LOC102725191A0A1B0GVB3 256 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 SULT1B1O43704 296 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 FADS1O60427 444 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 HRES1P13985 223 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 KCNE1P15382 129 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 MAP2K4P45985 399 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 ZNF140P52738 457 aaPredicted RBP2.54□□□□□ -2
TRAPPC8-203ENST00000577474 IFITM2Q01629 132 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 ZNF117Q03924 483 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 SLC9A3R2Q15599 337 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 PYDC2Q56P42 97 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 ZNF322Q6U7Q0 402 aaPredicted RBP2.54□□□□□ -2
TRAPPC8-203ENST00000577474 TCF24Q7RTU0 167 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 OR4K13Q8NH42 304 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 CDC26Q8NHZ8 85 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 BORCS7Q96B45 105 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 HEY1Q9Y5J3 304 aa2.54□□□□□ -2
TRAPPC8-203ENST00000577474 SPRR5A0A1B0GTR4 108 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 C9JCJ5 164 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 COX7A2LO14548 114 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 LY6HO94772 140 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 HAND1O96004 215 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 IGLV6-57P01721 117 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 CCL1P22362 96 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 CRHBPP24387 322 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 COL8A2P25067 703 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 RPL27AP46776 148 aaKnown RBP2.53□□□□□ -2
TRAPPC8-203ENST00000577474 TAS2R20P59543 309 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 GLT8D1Q68CQ7 371 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 ZNF664Q8N3J9 261 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 OR51D1Q8NGF3 324 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 RAB2BQ8WUD1 216 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 IGF2BP2-AS1Q96M15 143 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 CNBD2Q96M20 576 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 PKMYT1Q99640 499 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 CMSS1Q9BQ75 279 aaKnown RBP2.53□□□□□ -2
TRAPPC8-203ENST00000577474 ULBP3Q9BZM4 244 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 KIF26AQ9ULI4 1882 aaPredicted RBP2.53□□□□□ -2
TRAPPC8-203ENST00000577474 THSD7AQ9UPZ6 1657 aa2.53□□□□□ -2
TRAPPC8-203ENST00000577474 SMIM9A6NGZ8 99 aa2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 VGLL3A8MV65 326 aa2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 BHLHE40O14503 412 aa2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 NOS1APO75052 506 aaPredicted RBP2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 OR2B3O76000 313 aa2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 IGHV1-69P01742 117 aa2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 TTRP02766 147 aa2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 RNASE2P10153 161 aaKnown RBP2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 CD200P41217 278 aa2.52□□□□□ -2.01
TRAPPC8-203ENST00000577474 CAPZBP47756 277 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms