RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 SLC35B4Q969S0 331 aa1.26□□□□□ -2.21
COPS3-213ENST00000577210 MS4A6EQ96DS6 147 aa1.26□□□□□ -2.21
COPS3-213ENST00000577210 IMP4Q96G21 291 aaKnown RBP1.26□□□□□ -2.21
COPS3-213ENST00000577210 CAPZA3Q96KX2 299 aa1.26□□□□□ -2.21
COPS3-213ENST00000577210 MGLLQ99685 303 aa1.26□□□□□ -2.21
COPS3-213ENST00000577210 FAM96AQ9H5X1 160 aa1.26□□□□□ -2.21
COPS3-213ENST00000577210 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.26□□□□□ -2.21
COPS3-213ENST00000577210 HECW2Q9P2P5 1572 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 SCN1AP35498 2009 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 PCM1Q15154 2024 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 FLT4P35916 1363 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 C19orf71A6NCJ1 209 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 SMIM9A6NGZ8 99 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 OR4C45A6NMZ5 311 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 OR11H12B2RN74 326 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 EEF1E1-BLOC1S5C9J1V9 151 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 INMT-MINDY4F8WBC2 141 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 KPNA3O00505 521 aaPredicted RBP1.25□□□□□ -2.21
COPS3-213ENST00000577210 TP53I11O14683 189 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 DENRO43583 198 aaKnown RBP1.25□□□□□ -2.21
COPS3-213ENST00000577210 LY6HO94772 140 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 SERPINA1P01009 418 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 P0C880 135 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 CPMP14384 443 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 CRHBPP24387 322 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 HOXA6P31267 233 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 IDH3GP51553 393 aaPredicted RBP1.25□□□□□ -2.21
COPS3-213ENST00000577210 OR4D2P58180 307 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 RAB5BP61020 215 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 FABP9Q0Z7S8 132 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 SPA17Q15506 151 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 HIST3H3Q16695 136 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 FAM201AQ5SY85 155 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 SYPL2Q5VXT5 272 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 WDR59Q6PJI9 974 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 AMTNQ6UX39 209 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 ALKAL1Q6UXT8 129 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 TMPPEQ6ZT21 453 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 SLC35F6Q8N357 371 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 OR2D3Q8NGH3 330 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 OR11H2Q8NH07 326 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 FGF13Q92913 245 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 GNPNAT1Q96EK6 184 aaPredicted RBP1.25□□□□□ -2.21
COPS3-213ENST00000577210 SFRP2Q96HF1 295 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 OR8B2Q96RD0 313 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 CCL13Q99616 98 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 UPK3BQ9BT76 320 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 C1QTNF6Q9BXI9 259 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 TTTY13Q9BZ97 58 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 MRPL16Q9NX20 251 aaKnown RBP1.25□□□□□ -2.21
COPS3-213ENST00000577210 GLTPQ9NZD2 209 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 VPS29Q9UBQ0 182 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 ZNF391Q9UJN7 358 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 HHLA2Q9UM44 414 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 DYSFO75923 2080 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 PCF11O94913 1555 aaKnown RBP1.25□□□□□ -2.21
COPS3-213ENST00000577210 REREQ9P2R6 1566 aa1.25□□□□□ -2.21
COPS3-213ENST00000577210 CCDC144AA2RUR9 1427 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 ATAD5Q96QE3 1844 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 TRPM3Q9HCF6 1732 aaPredicted RBP1.24□□□□□ -2.21
COPS3-213ENST00000577210 DOCK9Q9BZ29 2069 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 A0A1B0GU33 70 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 LOC102725191A0A1B0GVB3 256 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 MDFIC2A0A1B0GVS7 189 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 TMEM269A0A1B0GVZ9 245 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 OR6C6A6NF89 314 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 LST1O00453 97 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 FADS1O60427 444 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 APOMO95445 188 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 FAM228BP0C875 321 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 NPPCP23582 126 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 CD200P41217 278 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 LPAR6P43657 344 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 GZMMP51124 257 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 TSPEAR-AS2P59090 65 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 ERVS71-1P61550 626 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 TBPL1P62380 186 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 CCL7P80098 99 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 MRPS25P82663 173 aaKnown RBP1.24□□□□□ -2.21
COPS3-213ENST00000577210 RUNX1Q01196 453 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 PMAIP1Q13794 54 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 TMED2Q15363 201 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 TAF1AQ15573 450 aaPredicted RBP1.24□□□□□ -2.21
COPS3-213ENST00000577210 PLPPR5Q32ZL2 321 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 FAM173BQ6P4H8 233 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 C2orf91Q6ZV80 131 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 SPATA12Q7Z6I5 190 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 OR6V1Q8N148 313 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 OR10P1Q8NGE3 313 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 OR5B17Q8NGF7 314 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 OR10D4PQ8NGN7 298 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 CEP19Q96LK0 163 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 CNBD2Q96M20 576 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 PPP1R2P1Q96PQ5 205 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 PKMYT1Q99640 499 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 MIEN1Q9BRT3 115 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 MND1Q9BWT6 205 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 C11orf1Q9H5F2 150 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 C16orf95Q9H693 158 aa1.24□□□□□ -2.21
COPS3-213ENST00000577210 VPREB3Q9UKI3 123 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms