RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	KLRC4-KLRK1	H3BQV0	150 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	IGHV2-70	P01814	119 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	CD46	P15529	392 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	WT1	P19544	449 aa	Predicted RBP	12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	GNB2	P62879	340 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	C1QL4	Q86Z23	238 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	OR10P1	Q8NGE3	313 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	GFOD1	Q9NXC2	390 aa		12.39	□□□□□ -0.43
PRPF8-216	ENST00000577001	HBE1	P02100	147 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	CTXN2	P0C2S0	81 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	BSX	Q3C1V8	233 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	SPATA31B1P	Q5VZV4	182 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	RND1	Q92730	232 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	SGK494	Q96LW2	274 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	CUL9	Q8IWT3	2517 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	RRH	O14718	337 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	SLC31A2	O15432	143 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	DNPH1	O43598	174 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	LRRC75B	Q2VPJ9	315 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	PRAMEF5	Q5TYX0	476 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	HIST3H2BB	Q8N257	126 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	SDF2L1	Q9HCN8	221 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	SLC17A3	O00476	420 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	REG1B	P48304	166 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	TMEM241	Q24JQ0	296 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	ZNF497	Q6ZNH5	498 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	LIN7C	Q9NUP9	197 aa	Known RBP	12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	MPC1	Q9Y5U8	109 aa		12.38	□□□□□ -0.43
PRPF8-216	ENST00000577001	RPL23	P62829	140 aa	Known RBP	12.37	□□□□□ -0.43
PRPF8-216	ENST00000577001	MEF2B	Q02080	365 aa	Predicted RBP	12.37	□□□□□ -0.43
PRPF8-216	ENST00000577001	PMS2P11	Q13670	270 aa		12.37	□□□□□ -0.43
PRPF8-216	ENST00000577001	ZNF320	A2RRD8	509 aa		12.37	□□□□□ -0.43
PRPF8-216	ENST00000577001	NPPC	P23582	126 aa		12.37	□□□□□ -0.43
PRPF8-216	ENST00000577001	TCL1A	P56279	114 aa		12.37	□□□□□ -0.43
PRPF8-216	ENST00000577001	C9orf106	Q8NAJ2	232 aa		12.37	□□□□□ -0.43
PRPF8-216	ENST00000577001	PINX1	Q96BK5	328 aa	Known RBP	12.37	□□□□□ -0.43
PRPF8-216	ENST00000577001	OR5B21	A6NL26	309 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001		B4E171	279 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	C11orf94	C9JXX5	98 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	GPX4	P36969	197 aa	Predicted RBP	12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	TSPAN7	P41732	249 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	PSMB3	P49720	205 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	DEFB109B	Q30KR1	87 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	TMEM41B	Q5BJD5	291 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	MRPL41	Q8IXM3	137 aa	Known RBP	12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	NHLRC2	Q8NBF2	726 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	YPEL4	Q96NS1	127 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	VAX2	Q9UIW0	290 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	IGKV3D-15	A0A087WSY6	115 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001		M0R1B8	84 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	GYPA	P02724	150 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	LMO1	P25800	156 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	HIST1H2BL	Q99880	126 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001		A0A1W2PPV4	95 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	FOXH1	O75593	365 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	IGHE	P01854	428 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	MSMP	Q1L6U9	139 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	MOGAT3	Q86VF5	341 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	TMEM256	Q8N2U0	113 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	DEFB124	Q8NES8	71 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	OR5B12	Q96R08	314 aa		12.36	□□□□□ -0.43
PRPF8-216	ENST00000577001	MARCH11	A6NNE9	402 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	CDX4	O14627	284 aa	Predicted RBP	12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	GPR12	P47775	334 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	SST	P61278	116 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	BATF	Q16520	125 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	KIAA1644	Q3SXP7	199 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	C1orf229	Q6ZS94	237 aa	Predicted RBP	12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	TMEM45B	Q96B21	275 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	LRRC30	A6NM36	301 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	SEC14L6	B5MCN3	397 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	PPP5D1	E7EU14	171 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	NUPR1	O60356	82 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	CECR9	P0C854	216 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	OR5I1	Q13606	314 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	IL22RA2	Q969J5	263 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	GCM1	Q9NP62	436 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001		A0A087X0M5	115 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	IGHV3-21	A0A0B4J1V1	117 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001		A0A1B0GX30	115 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	TMEM30CP	A0ZSE6	113 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	CD59	P13987	128 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	NDUFB7	P17568	137 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	G0S2	P27469	103 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	UBALD2	Q8IYN6	164 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	CD177	Q8N6Q3	437 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	IGFBPL1	Q8WX77	278 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	R3HDM4	Q96D70	268 aa		12.35	□□□□□ -0.43
PRPF8-216	ENST00000577001	MUC6	Q6W4X9	2439 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	SCGB1D1	O95968	90 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	CYB5R3	P00387	301 aa	Predicted RBP	12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	OR10J4	P0C629	311 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	GCH1	P30793	250 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	ZNF134	P52741	427 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	MRPL49	Q13405	166 aa	Known RBP	12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	KLF13	Q9Y2Y9	288 aa	Predicted RBP	12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	CLDN14	O95500	239 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	OR10A7	Q8NGE5	316 aa		12.34	□□□□□ -0.43
PRPF8-216	ENST00000577001	FAM216A	Q8WUB2	273 aa		12.34	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms