RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 ACSM3Q53FZ2 586 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 TMEM177Q53S58 311 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 LRRTM1Q86UE6 522 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 PQLC1Q8N2U9 271 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 MS4A15Q8N5U1 240 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 NECAP1Q8NC96 275 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 OR6M1Q8NGM8 313 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 SRSF12Q8WXF0 261 aaKnown RBP8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 ACOT12Q8WYK0 555 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 GGTLC1Q9BX51 225 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 OR2D2Q9H210 308 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 KCNK15Q9H427 330 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 SDHAF2Q9NX18 166 aa8.76□□□□□ -1.01
CTDNEP1-212ENST00000576613 C2orf70A6NJV1 201 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 TRDCB7Z8K6 153 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 ACTL6BO94805 426 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 NDUFB8O95169 186 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 MAP2K4P45985 399 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 UBE2KP61086 200 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 QRFPP83859 136 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 TPBGQ13641 420 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 PRSS8Q16651 343 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 TEX45Q8NA69 505 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 OR4A4PQ8NGN8 299 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 CYGBQ8WWM9 190 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 WDR89Q96FK6 387 aaPredicted RBP8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 SPIN2AQ99865 258 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 SPIN2BQ9BPZ2 258 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 CMSS1Q9BQ75 279 aaKnown RBP8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 LPAR5Q9H1C0 372 aa8.75□□□□□ -1.01
CTDNEP1-212ENST00000576613 LOC102724200A0A096LPH7 203 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 TRBV9A0A0B4J1U6 114 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 IGKV1-6A0A0C4DH72 117 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 SRRM4A7MD48 611 aaKnown RBP8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 LGALS9O00182 355 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 BET1O15155 118 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 GGCTO75223 188 aaKnown RBP8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 PRH1P02810 166 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 MRPS15P82914 257 aaKnown RBP8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 ZNF45Q02386 682 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 INSL4Q14641 139 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 C15orf32Q32M92 178 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 ANKRD55Q3KP44 614 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 HSD17B12Q53GQ0 312 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 SLC25A42Q86VD7 318 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 FAM89BQ8N5H3 189 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 OR52B4Q8NGK2 314 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 OR10J5Q8NHC4 309 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 ADTRPQ96IZ2 230 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 OVOL2Q9BRP0 275 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 S100A14Q9HCY8 104 aa8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 KLK5Q9Y337 293 aaPredicted RBP8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 RBM7Q9Y580 266 aaKnown RBP8.74□□□□□ -1.01
CTDNEP1-212ENST00000576613 PPP5D1E7EU14 171 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 FABP7O15540 132 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 CRYZL1O95825 349 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 CBLN1P23435 193 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 MRGPRG-AS1Q2M3A8 158 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 ZNF57Q68EA5 555 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 CEMP1Q6PRD7 247 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 IDO2Q6ZQW0 420 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 AHSA2Q719I0 299 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 TMEM61Q8N0U2 210 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 NANOGP1Q8N7R0 232 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 OSR1Q8TAX0 266 aaPredicted RBP8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 ARHGAP5-AS1Q96IT6 56 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 PLGRKTQ9HBL7 147 aa8.73□□□□□ -1.01
CTDNEP1-212ENST00000576613 A0A0J9YWU9 116 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 FOXI3A8MTJ6 420 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 OR2J3O76001 311 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 OR2C1O95371 312 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 DIRAS3O95661 229 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 HLA-AP01891 365 aaKnown RBP8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 CD37P11049 281 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 BMI1P35226 326 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 TNFRSF9Q07011 255 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 P2RY14Q15391 338 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 CEACAM19Q7Z692 300 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 GPHB5Q86YW7 130 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 MMD2Q8IY49 270 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 TTC9CQ8N5M4 171 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 OR56B1Q8NGI3 324 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 CABLES2Q9BTV7 478 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 PECRQ9BY49 303 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 ZNF430Q9H8G1 570 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 PSORS1C1Q9UIG5 152 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 TP53TG1Q9Y2A0 90 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 ZNF257Q9Y2Q1 563 aa8.72□□□□□ -1.01
CTDNEP1-212ENST00000576613 TRBV6-7A0A0A0MS04 114 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 ZNF320A2RRD8 509 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 ERICH4A6NGS2 130 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 A8MWP6 167 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 SLC17A2O00624 439 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 CD3GP09693 182 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 UCHL1P09936 223 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 EDN2P20800 178 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 RANBP1P43487 201 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 APOC4P55056 127 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 TMEM50BP56557 158 aa8.71□□□□□ -1.02
CTDNEP1-212ENST00000576613 CDK10Q15131 360 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms