RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 AGPAT2O15120 278 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 CHST10O43529 356 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 BANF1O75531 89 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 POP7O75817 140 aaKnown RBP2.52□□□□□ -2.01
NUP88-209ENST00000574855 OR2A4O95047 310 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 CSF3P09919 207 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 OR4A8P0C604 315 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 ERGP11308 486 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 PRTN3P24158 256 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 AQP1P29972 269 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 SELENOTP62341 195 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 ZNF616Q08AN1 781 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 SLC10A1Q14973 349 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 GRK1Q15835 563 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 CNPY1Q3B7I2 92 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 HIGD2BQ4VC39 106 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 MESTQ5EB52 335 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 ZNF506Q5JVG8 444 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 C1orf100Q5SVJ3 147 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 FAM201AQ5SY85 155 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 AKR1C8PQ5T2L2 129 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 CGB2Q6NT52 195 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 CLEC19AQ6UXS0 136 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 Q6ZR54 194 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 GOLT1AQ6ZVE7 132 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 OOSP2Q86WS3 158 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 OR11H6Q8NGC7 330 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 OR4S2Q8NH73 311 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 GNPDA2Q8TDQ7 276 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 GALMQ96C23 342 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 PDXPQ96GD0 296 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 CCDC115Q96NT0 180 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 OR2A7Q96R45 310 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 OR4K3Q96R72 315 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 SERPINI1Q99574 410 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 TBL1YQ9BQ87 522 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 PRSS27Q9BQR3 290 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 EBPLQ9BY08 206 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 VCXQ9H320 206 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 OR51I2Q9H344 312 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 ZDHHC11Q9H8X9 412 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 SLCO1B3Q9NPD5 702 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 UQCC1Q9NVA1 299 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 MED29Q9NX70 200 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 COPZ2Q9P299 210 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 CLCF1Q9UBD9 225 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 ZNF629Q9UEG4 869 aaPredicted RBP2.52□□□□□ -2.01
NUP88-209ENST00000574855 SIGLEC7Q9Y286 467 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 HDGFL3Q9Y3E1 203 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 SIP14410 1827 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 PARP14Q460N5 1801 aa2.52□□□□□ -2.01
NUP88-209ENST00000574855 PAPPA2Q9BXP8 1791 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 A0A0G2JMZ2 1700 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 IGHV1OR15-1A0A075B7D0 117 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 A0A0J9YXV3 536 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 A0A1B0GVG6 124 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 PLAC8L1A1L4L8 177 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 TRAPPC13A5PLN9 417 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 FAM25AB3EWG3 89 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 FAM25CB3EWG5 89 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 FAM25GB3EWG6 89 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 E7EQ34 232 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 DEGS1O15121 323 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 BCL2L11O43521 198 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 MMP23AO75900 390 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 KCNK2O95069 426 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 CA2P00918 260 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 IGF2P01344 180 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 OR8U8P0C7N1 319 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 FGF6P10767 208 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 FOLR2P14207 255 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 ZNF25P17030 456 aaPredicted RBP2.51□□□□□ -2.01
NUP88-209ENST00000574855 NELFEP18615 380 aaKnown RBP2.51□□□□□ -2.01
NUP88-209ENST00000574855 KLK2P20151 261 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 CDK2P24941 298 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 CD52P31358 61 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 FMO3P31513 532 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 TALDO1P37837 337 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 TAS2R46P59540 309 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 RRAS2P62070 204 aaPredicted RBP2.51□□□□□ -2.01
NUP88-209ENST00000574855 SRPXP78539 464 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 JOSD1Q15040 202 aaPredicted RBP2.51□□□□□ -2.01
NUP88-209ENST00000574855 C1orf194Q5T5A4 169 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 ZFAND6Q6FIF0 208 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 LCN12Q6JVE5 192 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 REG3GQ6UW15 175 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 CXCL17Q6UXB2 119 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 DEFB125Q8N687 156 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 NPRL2Q8WTW4 380 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 C2orf15Q8WU43 125 aaKnown RBP2.51□□□□□ -2.01
NUP88-209ENST00000574855 TMEM203Q969S6 136 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 GALNT14Q96FL9 552 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 AURKBQ96GD4 344 aaPredicted RBP2.51□□□□□ -2.01
NUP88-209ENST00000574855 ATXN7L3BQ96GX2 97 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 REEP6Q96HR9 211 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 C14orf144Q96I85 54 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 TCEAL7Q9BRU2 100 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 THTPAQ9BU02 230 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 GABARAPL3Q9BY60 117 aa2.51□□□□□ -2.01
NUP88-209ENST00000574855 SLC25A31Q9H0C2 315 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms