RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 BORCS7-ASMTA0A0B4J1R7 106 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 AARDQ4LEZ3 155 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 CLEC9AQ6UXN8 241 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 H2BFWTQ7Z2G1 175 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 LINC00311Q8N616 119 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 R3HDM4Q96D70 268 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 CXorf58Q96LI9 332 aa23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 YLPM1P49750 1951 aaKnown RBP23.3■■□□□ 1.32
CTDNEP1-210ENST00000574322 A6NNC1 897 aa23.29■■□□□ 1.32
CTDNEP1-210ENST00000574322 NXPH3O95157 252 aa23.29■■□□□ 1.32
CTDNEP1-210ENST00000574322 TNFRSF9Q07011 255 aa23.29■■□□□ 1.32
CTDNEP1-210ENST00000574322 TMED6Q8WW62 240 aa23.29■■□□□ 1.32
CTDNEP1-210ENST00000574322 TXNL1O43396 289 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 GOSR1O95249 250 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 FAM157CP0CG43 387 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 GNG10P50151 68 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 OR4S2Q8NH73 311 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 RNF141Q8WVD5 230 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 RAB1CQ92928 201 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 BARX1Q9HBU1 254 aaPredicted RBP23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 MIOXQ9UGB7 285 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 MED6O75586 246 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 TIMD4Q96H15 378 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 GINS3Q9BRX5 216 aa23.28■■□□□ 1.32
CTDNEP1-210ENST00000574322 ERVFRD-1P60508 538 aa23.27■■□□□ 1.32
CTDNEP1-210ENST00000574322 UBE2KP61086 200 aa23.27■■□□□ 1.32
CTDNEP1-210ENST00000574322 ZNF833PQ6ZTB9 187 aa23.27■■□□□ 1.32
CTDNEP1-210ENST00000574322 C11orf42Q8N5U0 333 aa23.27■■□□□ 1.32
CTDNEP1-210ENST00000574322 ZNF383Q8NA42 475 aa23.27■■□□□ 1.32
CTDNEP1-210ENST00000574322 C8orf46Q8TAG6 207 aa23.27■■□□□ 1.32
CTDNEP1-210ENST00000574322 REG4Q9BYZ8 158 aa23.27■■□□□ 1.32
CTDNEP1-210ENST00000574322 NQO2P16083 231 aa23.26■■□□□ 1.31
CTDNEP1-210ENST00000574322 CHODLQ9H9P2 273 aa23.26■■□□□ 1.31
CTDNEP1-210ENST00000574322 PFDN2Q9UHV9 154 aa23.26■■□□□ 1.31
CTDNEP1-210ENST00000574322 HRNRQ86YZ3 2850 aaPredicted RBP23.26■■□□□ 1.31
CTDNEP1-210ENST00000574322 HIST2H2BCQ6DN03 193 aa23.25■■□□□ 1.31
CTDNEP1-210ENST00000574322 FAM71F2Q6NXP2 309 aa23.25■■□□□ 1.31
CTDNEP1-210ENST00000574322 MFSD2BA6NFX1 497 aa23.25■■□□□ 1.31
CTDNEP1-210ENST00000574322 SULT1A1P50225 295 aa23.25■■□□□ 1.31
CTDNEP1-210ENST00000574322 ZNF266Q14584 549 aa23.25■■□□□ 1.31
CTDNEP1-210ENST00000574322 NEIL1Q96FI4 390 aaPredicted RBP23.25■■□□□ 1.31
CTDNEP1-210ENST00000574322 RBP4P02753 201 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 SEC11BP0C7V7 166 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 IGHV1-8P0DP01 117 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 AVPI1Q5T686 147 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 STX12Q86Y82 276 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 OR8B3Q8NGG8 313 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 MARVELD3Q96A59 401 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 OR8B2Q96RD0 313 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 RBKSQ9H477 322 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 PSENENQ9NZ42 101 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 PTPN13Q12923 2485 aa23.24■■□□□ 1.31
CTDNEP1-210ENST00000574322 CT45A6P0DMU7 189 aa23.23■■□□□ 1.31
CTDNEP1-210ENST00000574322 CT45A5P0DMU8 189 aa23.23■■□□□ 1.31
CTDNEP1-210ENST00000574322 CT45A7P0DMV0 189 aa23.23■■□□□ 1.31
CTDNEP1-210ENST00000574322 POU2AF1Q16633 256 aa23.23■■□□□ 1.31
CTDNEP1-210ENST00000574322 STPG2Q8N412 459 aa23.23■■□□□ 1.31
CTDNEP1-210ENST00000574322 EIF4E3Q8N5X7 224 aaKnown RBP23.23■■□□□ 1.31
CTDNEP1-210ENST00000574322 SAT2Q96F10 170 aaPredicted RBP23.23■■□□□ 1.31
CTDNEP1-210ENST00000574322 CACFD1Q9UGQ2 172 aa23.23■■□□□ 1.31
CTDNEP1-210ENST00000574322 J3QR06 171 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 LY6HO94772 140 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 SULT1A2P50226 295 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 ZNF137PP52743 207 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 ERVK-16P61578 105 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 AANATQ16613 207 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 WDR25Q64LD2 544 aaPredicted RBP23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 DHRS7BQ6IAN0 325 aaPredicted RBP23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 OR5C1Q8NGR4 320 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 SESN1Q9Y6P5 492 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 A0A1W2PPH5 198 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 SPP1P10451 314 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 DYNLT3P51808 116 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 TAGLNQ01995 201 aaKnown RBP23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 HSD17B13Q7Z5P4 300 aaPredicted RBP23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 OR9G1Q8NH87 305 aa23.22■■□□□ 1.31
CTDNEP1-210ENST00000574322 DOCK11Q5JSL3 2073 aa23.21■■□□□ 1.31
CTDNEP1-210ENST00000574322 PPIHO43447 177 aaKnown RBP23.21■■□□□ 1.31
CTDNEP1-210ENST00000574322 CST7O76096 145 aa23.21■■□□□ 1.31
CTDNEP1-210ENST00000574322 OR9G9P0C7N8 305 aa23.21■■□□□ 1.31
CTDNEP1-210ENST00000574322 IAPPP10997 89 aa23.21■■□□□ 1.31
CTDNEP1-210ENST00000574322 PDLIM3Q53GG5 364 aaPredicted RBP23.21■■□□□ 1.31
CTDNEP1-210ENST00000574322 UBTD1Q9HAC8 227 aa23.21■■□□□ 1.31
CTDNEP1-210ENST00000574322 LY86O95711 162 aa23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 F12P00748 615 aaPredicted RBP23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 ZNF787Q6DD87 383 aa23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 LY6G5BQ8NDX9 201 aa23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 OR1S2Q8NGQ3 325 aa23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 OR52E5Q8NH55 327 aa23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 TNFRSF14Q92956 283 aa23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 TMEM186Q96B77 213 aa23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 CIB3Q96Q77 187 aaPredicted RBP23.2■■□□□ 1.3
CTDNEP1-210ENST00000574322 TLE4Q04727 773 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 ST6GALNAC6Q969X2 333 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 TMEM133Q9H2Q1 129 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 PLA2G2EQ9NZK7 142 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 ZNRD1Q9P1U0 126 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 DFFBO76075 338 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 CRYZL1O95825 349 aa23.19■■□□□ 1.3
CTDNEP1-210ENST00000574322 CLINT1Q14677 625 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms