RNA–Protein interactions for RNA: ENST00000572665.1

CIITA-208, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 5

Gene CIITA, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-208ENST00000572665 MYOZ3Q8TDC0 251 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 FAM46BQ96A09 425 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 FLYWCH2Q96CP2 140 aaKnown RBP7.17□□□□□ -1.26
CIITA-208ENST00000572665 ORAI1Q96D31 301 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 RNF5Q99942 180 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 NABP2Q9BQ15 211 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 TMEM59Q9BXS4 323 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 CHMP1AQ9HD42 196 aaPredicted RBP7.17□□□□□ -1.26
CIITA-208ENST00000572665 CLEC2DQ9UHP7 191 aa7.17□□□□□ -1.26
CIITA-208ENST00000572665 SAA2-SAA4A0A096LPE2 208 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 IGHV7-81A0A0B4J1V7 117 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 PNMA8CA0A1B0GUJ8 204 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 A0A1W2PN81 502 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 LINC01619G3V211 115 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 I3L521 148 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 ITGB1BP1O14713 200 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 SAP30O75446 220 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 NDUFA3O95167 84 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 LALBAP00709 142 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 OR8U9P0C7N5 309 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 SAA2P0DJI9 122 aaPredicted RBP7.16□□□□□ -1.26
CIITA-208ENST00000572665 ZBTB25P24278 435 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 CHRNA7P36544 502 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 PPP1CCP36873 323 aaKnown RBP7.16□□□□□ -1.26
CIITA-208ENST00000572665 HSPA13P48723 471 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 HMGN3Q15651 99 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 ECSCRQ19T08 205 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 IL1F10Q8WWZ1 152 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 PHYHIPQ92561 330 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 GGHQ92820 318 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 URM1Q9BTM9 101 aaKnown RBP7.16□□□□□ -1.26
CIITA-208ENST00000572665 MRPL20Q9BYC9 149 aaKnown RBP7.16□□□□□ -1.26
CIITA-208ENST00000572665 ANKRD60Q9BZ19 345 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 SLA2Q9H6Q3 261 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 ISYNA1Q9NPH2 558 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 PLCXD1Q9NUJ7 323 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 PLEKHJ1Q9NW61 149 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 FOXA2Q9Y261 457 aaPredicted RBP7.16□□□□□ -1.26
CIITA-208ENST00000572665 WSB1Q9Y6I7 421 aa7.16□□□□□ -1.26
CIITA-208ENST00000572665 GAGE12JA6NER3 117 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 G3V318 75 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 H7C2Y5 167 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 HSPA12AO43301 675 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 BLVRBP30043 206 aaPredicted RBP7.15□□□□□ -1.26
CIITA-208ENST00000572665 CRIP2P52943 208 aaPredicted RBP7.15□□□□□ -1.26
CIITA-208ENST00000572665 PITPNAQ00169 270 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 KLF9Q13886 244 aaPredicted RBP7.15□□□□□ -1.26
CIITA-208ENST00000572665 RBM48Q5RL73 367 aaKnown RBP7.15□□□□□ -1.26
CIITA-208ENST00000572665 C6orf141Q5SZD1 244 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 MZT2BQ6NZ67 158 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 AHSA2Q719I0 299 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 TBC1D26Q86UD7 250 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 ODF3L1Q8IXM7 274 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 NANOGP1Q8N7R0 232 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 MINDY2Q8NBR6 621 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 ZNF485Q8NCK3 441 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 SETD6Q8TBK2 473 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 RNF183Q96D59 192 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 OR4C12Q96R67 309 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 TSNAXQ99598 290 aaKnown RBP7.15□□□□□ -1.26
CIITA-208ENST00000572665 MND1Q9BWT6 205 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 GNB4Q9HAV0 340 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 WASHC3Q9Y3C0 194 aa7.15□□□□□ -1.26
CIITA-208ENST00000572665 SLC22A1O15245 554 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 NDUFB8O95169 186 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 TFAP2AP05549 437 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 LGALS1P09382 135 aaKnown RBP7.14□□□□□ -1.27
CIITA-208ENST00000572665 HTR2CP28335 458 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 GNB1P62873 340 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 RPS27AP62979 156 aaKnown RBP7.14□□□□□ -1.27
CIITA-208ENST00000572665 MRPS15P82914 257 aaKnown RBP7.14□□□□□ -1.27
CIITA-208ENST00000572665 CBX3Q13185 183 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 GNMTQ14749 295 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 ACSM3Q53FZ2 586 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 HSD17B12Q53GQ0 312 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 AKIRIN2Q53H80 203 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 ACTBL2Q562R1 376 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 SIGIRRQ6IA17 410 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 FAM53AQ6NSI3 398 aaPredicted RBP7.14□□□□□ -1.27
CIITA-208ENST00000572665 CD200R1LQ6Q8B3 271 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 LYPD6Q86Y78 171 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 OR6M1Q8NGM8 313 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 DCUN1D4Q92564 292 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 SORL1Q92673 2214 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 RPL36ALQ969Q0 106 aaKnown RBP7.14□□□□□ -1.27
CIITA-208ENST00000572665 OR5B12Q96R08 314 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 ASCL2Q99929 193 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 SULT4A1Q9BR01 284 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 FAAP24Q9BTP7 215 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 CENPOQ9BU64 300 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 TM2D1Q9BX74 207 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 IFI27L2Q9H2X8 130 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 FKBP14Q9NWM8 211 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 SCN3BQ9NY72 215 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 PSORS1C1Q9UIG5 152 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 ZNF221Q9UK13 617 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 RAB26Q9ULW5 256 aa7.14□□□□□ -1.27
CIITA-208ENST00000572665 COL7A1Q02388 2944 aa7.13□□□□□ -1.27
CIITA-208ENST00000572665 TRBV6-6A0A0A6YYG2 114 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms