RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 APELAP0DMC3 54 aa13.85□□□□□ -0.19
CHD3-214ENST00000572579 DYRK1AQ13627 763 aa13.85□□□□□ -0.19
CHD3-214ENST00000572579 KLF5Q13887 457 aaPredicted RBP13.85□□□□□ -0.19
CHD3-214ENST00000572579 UBE2UQ5VVX9 321 aa13.85□□□□□ -0.19
CHD3-214ENST00000572579 SPARTQ8N0X7 666 aa13.85□□□□□ -0.19
CHD3-214ENST00000572579 HARBI1Q96MB7 349 aa13.85□□□□□ -0.19
CHD3-214ENST00000572579 ZNF355PQ9NSJ1 428 aa13.85□□□□□ -0.19
CHD3-214ENST00000572579 TNCP24821 2201 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 MSGN1A6NI15 193 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 J3QRK9 145 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 BRI3O95415 125 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 IGLV1-51P01701 117 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 GALP22466 123 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 CDNFQ49AH0 187 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 IDO2Q6ZQW0 420 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 TINAGL1Q9GZM7 467 aaPredicted RBP13.84□□□□□ -0.19
CHD3-214ENST00000572579 ATG5Q9H1Y0 275 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 TXNL4BQ9NX01 149 aaKnown RBP13.84□□□□□ -0.19
CHD3-214ENST00000572579 RAB26Q9ULW5 256 aa13.84□□□□□ -0.19
CHD3-214ENST00000572579 STARD9Q9P2P6 4700 aa13.83□□□□□ -0.19
CHD3-214ENST00000572579 H3BUA1 57 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 SHOXO15266 292 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 MYL9P24844 172 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 HSPA13P48723 471 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 BRWD1-AS2P59051 145 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 RPL30P62888 115 aaKnown RBP13.83□□□□□ -0.2
CHD3-214ENST00000572579 MRPS15P82914 257 aaKnown RBP13.83□□□□□ -0.2
CHD3-214ENST00000572579 PITPNAQ00169 270 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 ARFRP1Q13795 201 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 PRSS8Q16651 343 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 ADAD2Q8NCV1 583 aaKnown RBP13.83□□□□□ -0.2
CHD3-214ENST00000572579 VCX3BQ9H321 246 aa13.83□□□□□ -0.2
CHD3-214ENST00000572579 RANGRFQ9HD47 186 aaPredicted RBP13.83□□□□□ -0.2
CHD3-214ENST00000572579 IGKV1D-13A0A0B4J2D9 117 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 SSX5O60225 188 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 IGKV1-13P0DP09 117 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 NFYAP23511 347 aaPredicted RBP13.82□□□□□ -0.2
CHD3-214ENST00000572579 DTYMKP23919 212 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 GADD45AP24522 165 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 FGF9P31371 208 aaPredicted RBP13.82□□□□□ -0.2
CHD3-214ENST00000572579 UBE2KP61086 200 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 EIF4EBP1Q13541 118 aaPredicted RBP13.82□□□□□ -0.2
CHD3-214ENST00000572579 HACD4Q5VWC8 232 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 ZNF343Q6P1L6 599 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 TEX45Q8NA69 505 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 OR6Q1Q8NGQ2 317 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 OR4C12Q96R67 309 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 GINS4Q9BRT9 223 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 ST6GALNAC5Q9BVH7 336 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 BLOC1S6Q9UL45 172 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 TENM2Q9NT68 2774 aa13.82□□□□□ -0.2
CHD3-214ENST00000572579 C13orf42A0A1B0GVH6 325 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 METTL21EPA6NDL7 271 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 NOTOA8MTQ0 251 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 CRYZL1O95825 349 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 PRH1P02810 166 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 CLEC2LP0C7M8 214 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 CD40LGP29965 261 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 RANBP1P43487 201 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 GABARAPL2P60520 117 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 ZNF45Q02386 682 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 NUDCD2Q8WVJ2 157 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 RCHY1Q96PM5 261 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 RNF167Q9H6Y7 350 aa13.81□□□□□ -0.2
CHD3-214ENST00000572579 TMEM235A6NFC5 223 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 ERICH4A6NGS2 130 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 MRPS14O60783 128 aaKnown RBP13.8□□□□□ -0.2
CHD3-214ENST00000572579 HLA-DQB1P01920 261 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 CSN3P07498 182 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 TALDO1P37837 337 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 SYNJ2BPP57105 145 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 TAGLNQ01995 201 aaKnown RBP13.8□□□□□ -0.2
CHD3-214ENST00000572579 RTL8BQ17RB0 113 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 C10orf55Q5SWW7 151 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 TMEM68Q96MH6 324 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 THAP7Q9BT49 309 aaPredicted RBP13.8□□□□□ -0.2
CHD3-214ENST00000572579 OR51E2Q9H255 320 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 ZNF430Q9H8G1 570 aaPredicted RBP13.8□□□□□ -0.2
CHD3-214ENST00000572579 C19orf73Q9NVV2 129 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 RBM7Q9Y580 266 aaKnown RBP13.8□□□□□ -0.2
CHD3-214ENST00000572579 CSMD3Q7Z407 3707 aa13.8□□□□□ -0.2
CHD3-214ENST00000572579 A0A0G2JLM5 398 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 A0A1B0GW64 132 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 E7EUB6 86 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 SAA1P0DJI8 122 aaPredicted RBP13.79□□□□□ -0.2
CHD3-214ENST00000572579 IGHV4-30-4P0DP06 118 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 RRASP10301 218 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 ZP3P21754 424 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 PSMB9P28065 219 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 ADAMTSL5Q6ZMM2 481 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 VKORC1L1Q8N0U8 176 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 OR9G4Q8NGQ1 327 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 OR5H6Q8NGV6 325 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 SRSF12Q8WXF0 261 aaKnown RBP13.79□□□□□ -0.2
CHD3-214ENST00000572579 ADTRPQ96IZ2 230 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 GPHA2Q96T91 129 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 RSRP1Q9BUV0 290 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 PEF1Q9UBV8 284 aaKnown RBP13.79□□□□□ -0.2
CHD3-214ENST00000572579 DAPK2Q9UIK4 370 aa13.79□□□□□ -0.2
CHD3-214ENST00000572579 STUB1Q9UNE7 303 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms