RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 IQCF6A8MYZ5 107 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 NDUFB4O95168 129 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 ERVK-16P61578 105 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 BATFQ16520 125 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 LINC01551Q86U37 167 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 GBGT1Q8N5D6 347 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 OR4A16Q8NH70 328 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 R3HDM4Q96D70 268 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 DIRC2Q96SL1 478 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 MED12LQ86YW9 2145 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 ATRXP46100 2492 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 TMPRSS2O15393 492 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 PSPNO60542 156 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 ACP1P24666 158 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 ZXDAP98168 799 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 DCAF10Q5QP82 559 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 PRAMEF5Q5TYX0 476 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 PRAMEF6Q5VXH4 476 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 SDSLQ96GA7 329 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 WDYHV1Q96HA8 205 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 PSG11Q9UQ72 335 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 MARCH11A6NNE9 402 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 SP1P08047 785 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 CD46P15529 392 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 HOXC12P31275 282 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 TMEM249Q2WGJ8 235 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 PEAR1Q5VY43 1037 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-207ENST00000572253 RAB1CQ92928 201 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 DEFB127Q9H1M4 99 aa9.01□□□□□ -0.97
CCDC40-207ENST00000572253 HEYLQ9NQ87 328 aaPredicted RBP9.01□□□□□ -0.97
CCDC40-207ENST00000572253 CACNA1DQ01668 2161 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 MLNRO43193 412 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 TRAT1Q6PIZ9 186 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 USF3Q68DE3 2245 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 TRAV38-1A0A0B4J264 116 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 ZNF705FA8MVS1 300 aaPredicted RBP9□□□□□ -0.97
CCDC40-207ENST00000572253 TCAPO15273 167 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 ZNF705DP0CH99 300 aaPredicted RBP9□□□□□ -0.97
CCDC40-207ENST00000572253 ZNF705BP0CI00 300 aaPredicted RBP9□□□□□ -0.97
CCDC40-207ENST00000572253 GPR12P47775 334 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 ATP5G3P48201 142 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 SPCS3P61009 180 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 GNB1P62873 340 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 FOXL1Q12952 345 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 SGMS2Q8NHU3 365 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 MS4A10Q96PG2 267 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 CXXC4Q9H2H0 198 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 C21orf140B9A014 251 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 SMIM21Q3B7S5 101 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 DOCK11Q5JSL3 2073 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 CXorf67Q86X51 503 aaPredicted RBP9□□□□□ -0.97
CCDC40-207ENST00000572253 CHODLQ9H9P2 273 aa9□□□□□ -0.97
CCDC40-207ENST00000572253 AURKAIP1Q9NWT8 199 aaPredicted RBP9□□□□□ -0.97
CCDC40-207ENST00000572253 IGHV3-43A0A0B4J1X8 118 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 C15orf62A8K5M9 175 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 ZNF891A8MT65 544 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-207ENST00000572253 MT-CO2P00403 227 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 CELA3BP08861 270 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 SNRPCP09234 159 aaKnown RBP8.99□□□□□ -0.97
CCDC40-207ENST00000572253 IGHV3-43DP0DP04 118 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 BMP5P22003 454 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 ALKBH6Q3KRA9 238 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 SFRP2Q96HF1 295 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 QTRT1Q9BXR0 403 aaKnown RBP8.99□□□□□ -0.97
CCDC40-207ENST00000572253 ZDHHC11Q9H8X9 412 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 HES4Q9HCC6 221 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 TMEM265A0A087WTH1 108 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 TRGV5A0A0B4J1U4 118 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 A8MXE2 369 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 CXorf1O96002 111 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 ADH4P08319 380 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 EGR1P18146 543 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 CD82P27701 267 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 OR10J1P30954 320 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 RPL19P84098 196 aaKnown RBP8.99□□□□□ -0.97
CCDC40-207ENST00000572253 PSG7Q13046 419 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 EIF4EBP1Q13541 118 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-207ENST00000572253 DBX2Q6ZNG2 339 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 TGIF2LXQ8IUE1 241 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 OR10G8Q8NGN5 311 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 RFESDQ8TAC1 157 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 C5orf30Q96GV9 206 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 NAGKQ9UJ70 344 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 WNT9BO14905 357 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 DEFA4P12838 97 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 NPPCP23582 126 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 OPRK1P41145 380 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 INO80CQ6PI98 192 aaPredicted RBP8.99□□□□□ -0.97
CCDC40-207ENST00000572253 ZNF826PQ6ZT77 177 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 PRR7Q8TB68 274 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 PATZ1Q9HBE1 687 aaKnown RBP8.99□□□□□ -0.97
CCDC40-207ENST00000572253 GNG12Q9UBI6 72 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 PXMP4Q9Y6I8 212 aa8.99□□□□□ -0.97
CCDC40-207ENST00000572253 DEFB108AA8MXU0 73 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 TIMM8AO60220 97 aaPredicted RBP8.98□□□□□ -0.97
CCDC40-207ENST00000572253 FCGR3BO75015 233 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 TNFSF15O95150 251 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 RPL15P61313 204 aaKnown RBP8.98□□□□□ -0.97
CCDC40-207ENST00000572253 ZNF766Q5HY98 468 aa8.98□□□□□ -0.97
CCDC40-207ENST00000572253 ACP7Q6ZNF0 438 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms