RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 TMEM177Q53S58 311 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 IGSF11Q5DX21 431 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 PLAC9Q5JTB6 97 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 LAX1Q8IWV1 398 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 NANOGP1Q8N7R0 232 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 SRSF12Q8WXF0 261 aaKnown RBP14.38□□□□□ -0.11
NUP88-203ENST00000572019 RIMS4Q9H426 269 aaPredicted RBP14.38□□□□□ -0.11
NUP88-203ENST00000572019 C12orf4Q9NQ89 552 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 ZC4H2Q9NQZ6 224 aa14.38□□□□□ -0.11
NUP88-203ENST00000572019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.37□□□□□ -0.11
NUP88-203ENST00000572019 TRBV9A0A0B4J1U6 114 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 A0A0B4J203 849 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 SHOXO15266 292 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 BPNT1O95861 308 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 FOLR2P14207 255 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 SRMP19623 302 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 KIR2DS2P43631 304 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 TAGLNQ01995 201 aaKnown RBP14.37□□□□□ -0.11
NUP88-203ENST00000572019 MED21Q13503 144 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 TNXAQ16473 311 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 PRSS8Q16651 343 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 DYNLRB2Q8TF09 96 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 PECRQ9BY49 303 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 PSORS1C1Q9UIG5 152 aa14.37□□□□□ -0.11
NUP88-203ENST00000572019 TRDCB7Z8K6 153 aa14.36□□□□□ -0.11
NUP88-203ENST00000572019 MYL12BO14950 172 aa14.36□□□□□ -0.11
NUP88-203ENST00000572019 RPP25LQ8N5L8 163 aaKnown RBP14.36□□□□□ -0.11
NUP88-203ENST00000572019 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.36□□□□□ -0.11
NUP88-203ENST00000572019 DDB2Q92466 427 aa14.36□□□□□ -0.11
NUP88-203ENST00000572019 PHYHIPQ92561 330 aa14.36□□□□□ -0.11
NUP88-203ENST00000572019 CMSS1Q9BQ75 279 aaKnown RBP14.36□□□□□ -0.11
NUP88-203ENST00000572019 KCNK7Q9Y2U2 307 aa14.36□□□□□ -0.11
NUP88-203ENST00000572019 LINC00473A8K010 186 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 AIREO43918 545 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 CLDN12P56749 244 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 ATP5G2Q06055 141 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 CEACAM19Q7Z692 300 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 TMEM61Q8N0U2 210 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 SETD9Q8NE22 299 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 OR6M1Q8NGM8 313 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 MAFIPQ8WZ33 124 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 ST6GALNAC5Q9BVH7 336 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 HSF4Q9ULV5 492 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 S4R3C0 116 aa14.35□□□□□ -0.11
NUP88-203ENST00000572019 BET1O15155 118 aa14.34□□□□□ -0.11
NUP88-203ENST00000572019 OR2J3O76001 311 aa14.34□□□□□ -0.11
NUP88-203ENST00000572019 OR2C1O95371 312 aa14.34□□□□□ -0.11
NUP88-203ENST00000572019 IGHV3-23P01764 117 aa14.34□□□□□ -0.11
NUP88-203ENST00000572019 GSTT2P0CG29 244 aa14.34□□□□□ -0.11
NUP88-203ENST00000572019 GSTT2BP0CG30 244 aa14.34□□□□□ -0.11
NUP88-203ENST00000572019 ACOT12Q8WYK0 555 aa14.34□□□□□ -0.11
NUP88-203ENST00000572019 ZNF430Q9H8G1 570 aaPredicted RBP14.34□□□□□ -0.11
NUP88-203ENST00000572019 FKBP14Q9NWM8 211 aa14.34□□□□□ -0.11
NUP88-203ENST00000572019 A0A0J9YWU9 116 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 CXorf65A6NEN9 183 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 FAM223BA6NKX1 122 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 MPPED1O15442 326 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 FABP7O15540 132 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 CRYZL1O95825 349 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 UBE2KP61086 200 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 C15orf32Q32M92 178 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 HSD17B12Q53GQ0 312 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 FAM223AQ8IWN6 122 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 TEX45Q8NA69 505 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 THRSPQ92748 146 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 URM1Q9BTM9 101 aaKnown RBP14.33□□□□□ -0.12
NUP88-203ENST00000572019 CABLES2Q9BTV7 478 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 MLXQ9UH92 298 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 MGAT4AQ9UM21 535 aa14.33□□□□□ -0.12
NUP88-203ENST00000572019 AK6Q9Y3D8 172 aaKnown RBP14.33□□□□□ -0.12
NUP88-203ENST00000572019 HMX3A6NHT5 357 aa14.32□□□□□ -0.12
NUP88-203ENST00000572019 UCHL1P09936 223 aa14.32□□□□□ -0.12
NUP88-203ENST00000572019 BPIFB6Q8NFQ5 453 aa14.32□□□□□ -0.12
NUP88-203ENST00000572019 OR4A4PQ8NGN8 299 aa14.32□□□□□ -0.12
NUP88-203ENST00000572019 FBLIM1Q8WUP2 373 aa14.32□□□□□ -0.12
NUP88-203ENST00000572019 CCDC140Q96MF4 163 aa14.32□□□□□ -0.12
NUP88-203ENST00000572019 LSM2Q9Y333 95 aaKnown RBP14.32□□□□□ -0.12
NUP88-203ENST00000572019 TRBV6-7A0A0A0MS04 114 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 A0A1B0GW64 132 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 TMEM213A2RRL7 107 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 E7EUB6 86 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 SLC17A2O00624 439 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 DEDDO75618 318 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 SAA1P0DJI8 122 aaPredicted RBP14.31□□□□□ -0.12
NUP88-203ENST00000572019 CBLN1P23435 193 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 DUTP33316 252 aaKnown RBP14.31□□□□□ -0.12
NUP88-203ENST00000572019 RTL8BQ17RB0 113 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 VMA21Q3ZAQ7 101 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 TTC23Q5W5X9 447 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 TMEM91Q6ZNR0 172 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 MS4A15Q8N5U1 240 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 TMEM203Q969S6 136 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 GGTLC1Q9BX51 225 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 PLGRKTQ9HBL7 147 aa14.31□□□□□ -0.12
NUP88-203ENST00000572019 IGKV1D-8A0A087WSZ0 117 aa14.3□□□□□ -0.12
NUP88-203ENST00000572019 SCAF4O95104 1147 aaKnown RBP14.3□□□□□ -0.12
NUP88-203ENST00000572019 FCGR3AP08637 254 aa14.3□□□□□ -0.12
NUP88-203ENST00000572019 DHRSXQ8N5I4 330 aa14.3□□□□□ -0.12
NUP88-203ENST00000572019 TTC9CQ8N5M4 171 aa14.3□□□□□ -0.12
NUP88-203ENST00000572019 NECAP1Q8NC96 275 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms