RNA–Protein interactions for RNA: ENST00000571805.5

VPS53-211, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-211ENST00000571805 AHRRA9YTQ3 701 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 KBTBD11O94819 623 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 OR9G9P0C7N8 305 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 TMEM241Q24JQ0 296 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 AARDQ4LEZ3 155 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 BHLHA15Q7RTS1 189 aaPredicted RBP18.93■□□□□ 0.62
VPS53-211ENST00000571805 C1orf174Q8IYL3 243 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 ACTR3CQ9C0K3 210 aaPredicted RBP18.93■□□□□ 0.62
VPS53-211ENST00000571805 ASPMQ8IZT6 3477 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 SRRM5B3KS81 715 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 TMEM250H0YL14 139 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 PHOX2AO14813 284 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 OPN1MWP04001 364 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 OPN1MW2P0DN77 364 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 OPN1MW3P0DN78 364 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 Q8N7P7 452 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 FRZBQ92765 325 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 RAB24Q969Q5 203 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 PROCRQ9UNN8 238 aa18.93■□□□□ 0.62
VPS53-211ENST00000571805 NBEAQ8NFP9 2946 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 FTH1P19P0C7X4 201 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 GZMHP20718 246 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 S100PP25815 95 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 TLE1Q04724 770 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 MZT1Q08AG7 82 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 P2RY6Q15077 328 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 MORN2Q502X0 79 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 FAM90A1Q86YD7 464 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 EDARADDQ8WWZ3 215 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 SLC25A15Q9Y619 301 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 TRGC1P0CF51 173 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 GPR12P47775 334 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 LRP11Q86VZ4 500 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 FAM169BQ8N8A8 192 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 DEFB124Q8NES8 71 aa18.92■□□□□ 0.62
VPS53-211ENST00000571805 SPAARA0A1B0GVQ0 90 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 TGOLN2O43493 480 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 ADIRFQ15847 76 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 CR1LQ2VPA4 569 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 SEM1Q6ZVN7 128 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 ZNF709Q8N972 641 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 PLPPR2Q96GM1 343 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 MANBALQ9NQG1 85 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 GAR1Q9NY12 217 aaKnown RBP18.91■□□□□ 0.62
VPS53-211ENST00000571805 OR6C3Q9NZP0 311 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 NDUFS6O75380 124 aaKnown RBP18.91■□□□□ 0.62
VPS53-211ENST00000571805 RPUSD4Q96CM3 377 aaKnown RBP18.91■□□□□ 0.62
VPS53-211ENST00000571805 HCFC1P51610 2035 aa18.91■□□□□ 0.62
VPS53-211ENST00000571805 SEC14L6B5MCN3 397 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 FCGR3BO75015 233 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 RPL23P62829 140 aaKnown RBP18.9■□□□□ 0.62
VPS53-211ENST00000571805 PARLQ9H300 379 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 JPT1Q9UK76 154 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 HPRT1P00492 218 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 IGHV2-70P01814 119 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 SOD3P08294 240 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 CFHR2P36980 270 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 SPRNQ5BIV9 151 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 PYY3Q5JQD4 70 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 GFI1BQ5VTD9 330 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 GCSAMQ8N6F7 178 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 Q8TCH9 128 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 SNX22Q96L94 193 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 DIRC2Q96SL1 478 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 GNG12Q9UBI6 72 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 CFAP47Q6ZTR5 3102 aa18.9■□□□□ 0.62
VPS53-211ENST00000571805 FAM90A9PA6NNJ1 464 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 MGST3O14880 152 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 YPEL1O60688 119 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 PFN1P07737 140 aaKnown RBP18.89■□□□□ 0.61
VPS53-211ENST00000571805 LOXL3P58215 753 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 NKX6-1P78426 367 aaPredicted RBP18.89■□□□□ 0.61
VPS53-211ENST00000571805 BSXQ3C1V8 233 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 YPEL2Q96QA6 119 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 DUSP13Q9UII6 198 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 WDR83OSQ9Y284 106 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 C17orf112F2Z3M2 114 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 DEFA4P12838 97 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 ZNF134P52741 427 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 C16orf82Q7Z2V1 217 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 HIST3H2BBQ8N257 126 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 OR4F5Q8NH21 305 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 OR4F4Q96R69 305 aa18.89■□□□□ 0.61
VPS53-211ENST00000571805 IGHV3OR15-7A0A075B7D8 119 aa18.88■□□□□ 0.61
VPS53-211ENST00000571805 S100A2P29034 98 aa18.88■□□□□ 0.61
VPS53-211ENST00000571805 PYGO2Q9BRQ0 406 aa18.88■□□□□ 0.61
VPS53-211ENST00000571805 PAGE4O60829 102 aa18.88■□□□□ 0.61
VPS53-211ENST00000571805 DEFB109BQ30KR1 87 aa18.88■□□□□ 0.61
VPS53-211ENST00000571805 FAM216AQ8WUB2 273 aa18.88■□□□□ 0.61
VPS53-211ENST00000571805 ELOA3CA0A087WX78 387 aaPredicted RBP18.87■□□□□ 0.61
VPS53-211ENST00000571805 MBD3L4A6NDZ8 208 aaPredicted RBP18.87■□□□□ 0.61
VPS53-211ENST00000571805 MBD3L3A6NE82 208 aaPredicted RBP18.87■□□□□ 0.61
VPS53-211ENST00000571805 MBD3L5A6NJ08 208 aaPredicted RBP18.87■□□□□ 0.61
VPS53-211ENST00000571805 M0R1X1 148 aa18.87■□□□□ 0.61
VPS53-211ENST00000571805 F2RL2O00254 374 aa18.87■□□□□ 0.61
VPS53-211ENST00000571805 CD1BP29016 333 aa18.87■□□□□ 0.61
VPS53-211ENST00000571805 RPL39P5Q59GN2 51 aa18.87■□□□□ 0.61
VPS53-211ENST00000571805 MBD3L2Q8NHZ7 208 aaPredicted RBP18.87■□□□□ 0.61
VPS53-211ENST00000571805 GPR61Q9BZJ8 451 aa18.87■□□□□ 0.61
VPS53-211ENST00000571805 PARD6AQ9NPB6 346 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms