RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 C8orf88P0DMB2 117 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 RPL35AP18077 110 aaKnown RBP6.39□□□□□ -1.39
SMG1-216ENST00000569122 SSBP2P81877 361 aaPredicted RBP6.39□□□□□ -1.39
SMG1-216ENST00000569122 FLOT2Q14254 428 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 TNXAQ16473 311 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 PVRIGQ6DKI7 326 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 AWAT2Q6E213 333 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 JAGN1Q8N5M9 183 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 POM121L12Q8N7R1 296 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 ZNF383Q8NA42 475 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 SETD9Q8NE22 299 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 OR13C5Q8NGS8 318 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 OR11H2Q8NH07 326 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 OR4A5Q8NH83 315 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 SRSF12Q8WXF0 261 aaKnown RBP6.39□□□□□ -1.39
SMG1-216ENST00000569122 CACNG8Q8WXS5 425 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 EEF1AKMT3Q96AZ1 226 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 Q96M66 194 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 THTPAQ9BU02 230 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 GABARAPL3Q9BY60 117 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 GABARAPL1Q9H0R8 117 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 C11orf54Q9H0W9 315 aaPredicted RBP6.39□□□□□ -1.39
SMG1-216ENST00000569122 BANF2Q9H503 90 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 ISG20L2Q9H9L3 353 aaKnown RBP6.39□□□□□ -1.39
SMG1-216ENST00000569122 ZNF257Q9Y2Q1 563 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 DNAH11Q96DT5 4516 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 DNAH2Q9P225 4427 aa6.39□□□□□ -1.39
SMG1-216ENST00000569122 TRAV10A0A0B4J240 114 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 TCRBV3S1A0A5B6 114 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 DPPA5A6NC42 116 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 M0R1X1 148 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 RBMXL2O75526 392 aaKnown RBP6.38□□□□□ -1.39
SMG1-216ENST00000569122 OR2J3O76001 311 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 HLA-AP01891 365 aaKnown RBP6.38□□□□□ -1.39
SMG1-216ENST00000569122 APELAP0DMC3 54 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 UBE2KP61086 200 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 MED21Q13503 144 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 PRSS8Q16651 343 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 ZNF585BQ52M93 769 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 MAPKAPK5-AS1Q8N8E1 139 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 ACOT12Q8WYK0 555 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 MUL1Q969V5 352 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 Q96MT0 163 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 CIB1Q99828 191 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 RNF126Q9BV68 326 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 DMRT1Q9Y5R6 373 aa6.38□□□□□ -1.39
SMG1-216ENST00000569122 IGHV4-4A0A075B6R2 117 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 TRBV7-1A0A0A6YYK4 115 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 E9PI62 339 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 PRH1P02810 166 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 UBBP0CG47 229 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 HIST1H1BP16401 226 aaKnown RBP6.37□□□□□ -1.39
SMG1-216ENST00000569122 IGFBP3P17936 291 aaPredicted RBP6.37□□□□□ -1.39
SMG1-216ENST00000569122 PSMB6P28072 239 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 SERPINB10P48595 397 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 ATP6AP1Q15904 470 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 SIGIRRQ6IA17 410 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 ZNF880Q6PDB4 577 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 CLEC19AQ6UXS0 136 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 MMD2Q8IY49 270 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 SVOPQ8N4V2 548 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 SETD6Q8TBK2 473 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 LGALS12Q96DT0 336 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 ADTRPQ96IZ2 230 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 CXorf58Q96LI9 332 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 UQCC2Q9BRT2 126 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 MED4Q9NPJ6 270 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 ERVK13-1Q9NX77 482 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 UBQLN2Q9UHD9 624 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 ORC6Q9Y5N6 252 aa6.37□□□□□ -1.39
SMG1-216ENST00000569122 DYNC1H1Q14204 4646 aaKnown RBP6.37□□□□□ -1.39
SMG1-216ENST00000569122 TRBV6-6A0A0A6YYG2 114 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 ERICH4A6NGS2 130 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 NPIPB5A8MRT5 1133 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 MRPS14O60783 128 aaKnown RBP6.36□□□□□ -1.39
SMG1-216ENST00000569122 PROP1O75360 226 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 NAPSAO96009 420 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 FCGR1AP12314 374 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 EDN2P20800 178 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 FCGR2BP31994 310 aaPredicted RBP6.36□□□□□ -1.39
SMG1-216ENST00000569122 POLR2IP36954 125 aaKnown RBP6.36□□□□□ -1.39
SMG1-216ENST00000569122 TMEM187Q14656 261 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 Q499Y3 187 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 LIPKQ5VXJ0 399 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 TMPRSS11AQ6ZMR5 421 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 C5orf24Q7Z6I8 188 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 ZNF575Q86XF7 245 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 Q8N1X5 172 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 NKAIN3Q8N8D7 197 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 OSR1Q8TAX0 266 aaPredicted RBP6.36□□□□□ -1.39
SMG1-216ENST00000569122 CD300LFQ8TDQ1 290 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 FAAP24Q9BTP7 215 aa6.36□□□□□ -1.39
SMG1-216ENST00000569122 SRRM4A7MD48 611 aaKnown RBP6.35□□□□□ -1.39
SMG1-216ENST00000569122 C16orf90A8MZG2 172 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 M0R2N4 97 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 IFNA10P01566 189 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 IFNA21P01568 189 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 IFNA17P01571 189 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 CLEC3BP05452 202 aa6.35□□□□□ -1.39
SMG1-216ENST00000569122 LINC00205P59089 165 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms