RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 RCL1Q9Y2P8 373 aaKnown RBP4.69□□□□□ -1.66
SF3B3-210ENST00000567654 KCNIP3Q9Y2W7 256 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 UBE2J1Q9Y385 318 aaPredicted RBP4.69□□□□□ -1.66
SF3B3-210ENST00000567654 LSM5Q9Y4Y9 91 aaKnown RBP4.69□□□□□ -1.66
SF3B3-210ENST00000567654 U3KQ87 197 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 COL12A1Q99715 3063 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 CSMD1Q96PZ7 3565 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 ZFYVE26Q68DK2 2539 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 WNK2Q9Y3S1 2297 aa4.69□□□□□ -1.66
SF3B3-210ENST00000567654 CR1P17927 2039 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 TRGV11A0A075B6L2 103 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 KBTBD11-OT1A0A1B0GTJ5 212 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 LRRC30A6NM36 301 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 DVL1O14640 695 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 SPINT2O43291 252 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 BCL2L11O43521 198 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 YPEL1O60688 119 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 DEDDO75618 318 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 S1PR2O95136 353 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 RLN2P04090 185 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 HKR1P10072 659 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 HTR2BP41595 481 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 GNG10P50151 68 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 DLX6P56179 175 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 PRB3Q04118 309 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-210ENST00000567654 FGL1Q08830 312 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF816Q0VGE8 651 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF345Q14585 488 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 RPL39P5Q59GN2 51 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 CT45A1Q5HYN5 189 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 CXorf66Q5JRM2 361 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-210ENST00000567654 NCR3LG1Q68D85 454 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 TRAT1Q6PIZ9 186 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF841Q6ZN19 808 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 ACOT7LQ6ZUV0 252 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 DTX2Q86UW9 622 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF695Q8IW36 515 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 CMTM1Q8IZ96 169 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 C1orf87Q8N0U7 546 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 CT45A3Q8NHU0 189 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 THAP6Q8TBB0 222 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 CORO2AQ92828 525 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 RBPMSQ93062 196 aaKnown RBP4.68□□□□□ -1.66
SF3B3-210ENST00000567654 Q96MF0 132 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 YPEL2Q96QA6 119 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF251Q9BRH9 671 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 NCOR1P1Q9H4R4 102 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 UBTD1Q9HAC8 227 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 CYTL1Q9NRR1 136 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 CBLN4Q9NTU7 201 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 IDI2-AS1Q9NZ38 188 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 OR6C3Q9NZP0 311 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 CLN8Q9UBY8 286 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 PAIP2BQ9ULR5 123 aaKnown RBP4.68□□□□□ -1.66
SF3B3-210ENST00000567654 TMED3Q9Y3Q3 217 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 RBM7Q9Y580 266 aaKnown RBP4.68□□□□□ -1.66
SF3B3-210ENST00000567654 USP9XQ93008 2570 aaPredicted RBP4.68□□□□□ -1.66
SF3B3-210ENST00000567654 FLNCQ14315 2725 aa4.68□□□□□ -1.66
SF3B3-210ENST00000567654 TACC2O95359 2948 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 SAA2-SAA4A0A096LPE2 208 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 TRGV10A0A0A0MS01 117 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 DUXBA0A1W2PPF3 345 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 CLEC18AA5D8T8 446 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF729A6NN14 1252 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 PITX3O75364 302 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 OR2F2O95006 317 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 TMEM50AO95807 157 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 IFNA21P01568 189 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 P0C879 139 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 SAA2P0DJI9 122 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 EGR2P11161 476 aaPredicted RBP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 GZMHP20718 246 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 NFYBP25208 207 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 DUTP33316 252 aaKnown RBP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 LPAR6P43657 344 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 PAX9P55771 341 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 POLR2GP62487 172 aaKnown RBP eCLIP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 CYCSP99999 105 aaKnown RBP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 OR2F1Q13607 317 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 HFEQ30201 348 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 MIDNQ504T8 468 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 ALKAL2Q6UX46 152 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 Q6YL49 198 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 ZNF767PQ75MW2 155 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 C11orf42Q8N5U0 333 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 CLEC18CQ8NCF0 446 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 TCTEX1D2Q8WW35 142 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 DDB2Q92466 427 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 H1FXQ92522 213 aaKnown RBP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 IL22RA2Q969J5 263 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 AQP10Q96PS8 301 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 ABHD14AQ9BUJ0 271 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 MAGT1Q9H0U3 335 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 LINC00574Q9H8X3 128 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 WFDC1Q9HC57 220 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 LIN7CQ9NUP9 197 aaKnown RBP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 GNG12Q9UBI6 72 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 KAAG1Q9UBP8 84 aa4.67□□□□□ -1.66
SF3B3-210ENST00000567654 RPUSD1Q9UJJ7 312 aaKnown RBP4.67□□□□□ -1.66
SF3B3-210ENST00000567654 LAMP3Q9UQV4 416 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms