RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 NIPBLQ6KC79 2804 aaeCLIP3.8□□□□□ -1.8
KARS-208ENST00000566772 NUP210LQ5VU65 1888 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 DIDO1Q9BTC0 2240 aaKnown RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 TRAV8-3A0A0A6YYJ7 113 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 IGKV1-6A0A0C4DH72 117 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 LRRN3E7EW58 273 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 AZIN1O14977 448 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 PLIN3O60664 434 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 POP7O75817 140 aaKnown RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 OR2B3O76000 313 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 IFNA5P01569 189 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 IGKV1-39P01597 117 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 IGKV1D-39P04432 117 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 MRPL3P09001 348 aaKnown RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 COX6B1P14854 86 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 CA5AP35218 305 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 CDKN2CP42773 168 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 NKX2-5P52952 324 aaPredicted RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 MYL5Q02045 173 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 FAM53BQ14153 422 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 PAFAH1B3Q15102 231 aaKnown RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 SSX1Q16384 188 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 DEFB116Q30KQ4 102 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 DEFB110Q30KQ9 67 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 TEX30Q5JUR7 227 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 SHISA6Q6ZSJ9 500 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 FAM19A5Q7Z5A7 132 aaPredicted RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 WDR86Q86TI4 376 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 LINC00596Q86U02 117 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 MUC15Q8N387 334 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 Q8N402 240 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 ST6GALNAC3Q8NDV1 305 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 OR4P4Q8NGL7 312 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 SRSF12Q8WXF0 261 aaKnown RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 CHMP6Q96FZ7 201 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 DCUN1D1Q96GG9 259 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 IP6K3Q96PC2 410 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 RNF157Q96PX1 679 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 LYSMD1Q96S90 227 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 ZNF436Q9C0F3 470 aaPredicted RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 SND1-IT1Q9HBX3 110 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 SPANXB1Q9NS25 103 aaPredicted RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 ZNF355PQ9NSJ1 428 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 DHCR7Q9UBM7 475 aaKnown RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 ZNF706Q9Y5V0 76 aaPredicted RBP3.79□□□□□ -1.8
KARS-208ENST00000566772 MTORP42345 2549 aa3.79□□□□□ -1.8
KARS-208ENST00000566772 CSMD2Q7Z408 3487 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
KARS-208ENST00000566772 METTL15A6NJ78 407 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 C2orf74A8MZ97 194 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 GYG2O15488 501 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 ZNF207O43670 478 aaKnown RBP3.78□□□□□ -1.8
KARS-208ENST00000566772 EPPINO95925 133 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 CECR9P0C854 216 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 AKR1C4P17516 323 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 IFNGR2P38484 337 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 TGM4P49221 684 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 DCDP81605 110 aaKnown RBP3.78□□□□□ -1.8
KARS-208ENST00000566772 SMAGPQ0VAQ4 97 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 PDK2Q15119 407 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 UBE2NLQ5JXB2 153 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 TTC33Q6PID6 262 aaPredicted RBP3.78□□□□□ -1.8
KARS-208ENST00000566772 GLT6D1Q7Z4J2 308 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 PDPNQ86YL7 162 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 OR5M1Q8NGP8 315 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 FAM57AQ8TBR7 257 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 C17orf50Q8WW18 174 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 PTH2Q96A98 100 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 IMP4Q96G21 291 aaKnown RBP3.78□□□□□ -1.8
KARS-208ENST00000566772 TRIB3Q96RU7 358 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 CDCA4Q9BXL8 241 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 HRASLSQ9HDD0 168 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 FBXO6Q9NRD1 293 aaPredicted RBP3.78□□□□□ -1.8
KARS-208ENST00000566772 FAM206AQ9NX38 181 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 BTRCQ9Y297 605 aa3.78□□□□□ -1.8
KARS-208ENST00000566772 CCDC88CQ9P219 2028 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 SVILO95425 2214 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 IGHV3-49A0A0A0MS15 119 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 SMIM23A6NLE4 172 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 TMEM210A6NLX4 147 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 KLLNB2CW77 178 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 CENPBD1B2RD01 187 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 CXCR6O00574 342 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 MAGEB4O15481 346 aaPredicted RBP3.77□□□□□ -1.81
KARS-208ENST00000566772 COX7A2P2O60397 106 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 KLF7O75840 302 aaPredicted RBP3.77□□□□□ -1.81
KARS-208ENST00000566772 ATP5HO75947 161 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 SOX14O95416 240 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 HLA-DQB1P01920 261 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 TYMSP04818 313 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 C8orf88P0DMB2 117 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 NQO1P15559 274 aaKnown RBP3.77□□□□□ -1.81
KARS-208ENST00000566772 PRTN3P24158 256 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 IMPG1Q17R60 797 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 SAPCD1Q5SSQ6 148 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 OGFRL1Q5TC84 451 aaPredicted RBP3.77□□□□□ -1.81
KARS-208ENST00000566772 GLYATQ6IB77 296 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 IGFL3Q6UXB1 125 aa3.77□□□□□ -1.81
KARS-208ENST00000566772 Q6ZS92 163 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms