RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 A0A1W2PRM7 423 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 J3QR06 171 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 TOX4O94842 621 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 WDR25Q64LD2 544 aaPredicted RBP9.76□□□□□ -0.85
CDH1-210ENST00000566612 SLC35E4Q6ICL7 350 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 GAL3ST2Q9H3Q3 398 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 ZDHHC11Q9H8X9 412 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 IFT22Q9H7X7 185 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 INTS1Q8N201 2190 aaKnown RBP9.76□□□□□ -0.85
CDH1-210ENST00000566612 COX7A2P2O60397 106 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 LINC00205P59089 165 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 RHOBP62745 196 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 ACSF3Q4G176 576 aaPredicted RBP9.76□□□□□ -0.85
CDH1-210ENST00000566612 MIC13Q5XKP0 118 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 ZNF497Q6ZNH5 498 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 ZCCHC24Q8N2G6 241 aaKnown RBP9.76□□□□□ -0.85
CDH1-210ENST00000566612 MDS2Q8NDY4 140 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 TMEM171Q8WVE6 324 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 HARBI1Q96MB7 349 aa9.76□□□□□ -0.85
CDH1-210ENST00000566612 QTRT1Q9BXR0 403 aaKnown RBP9.76□□□□□ -0.85
CDH1-210ENST00000566612 IQCF6A8MYZ5 107 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 C9JQL5 133 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 RAB29O14966 203 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 ASCL4Q6XD76 172 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 LINC00518Q8N0U6 118 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 MISP3Q96FF7 219 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 WDR61Q9GZS3 305 aaKnown RBP9.75□□□□□ -0.85
CDH1-210ENST00000566612 MUC6Q6W4X9 2439 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 IGKV1-6A0A0C4DH72 117 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 LRP11Q86VZ4 500 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 OR2T10Q8NGZ9 312 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 ZNF355PQ9NSJ1 428 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 TMEM131Q92545 1883 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 ZGRF1Q86YA3 2104 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 IGHV3-72A0A0B4J1Y9 119 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 A0A0G2JRQ6 117 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 XKRY2A2RUG3 117 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 J3QW42 95 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 IGLV3-1P01715 115 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 PSG5Q15238 335 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 HFEQ30201 348 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 WDR82Q6UXN9 313 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 COLCA1Q6ZS62 124 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 TPPP3Q9BW30 176 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 TMEM140Q9NV12 185 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 MIOXQ9UGB7 285 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 ANAPC10Q9UM13 185 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 NDUFB4O95168 129 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 LGALS4P56470 323 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 PRO1933Q9H354 126 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 HES4Q9HCC6 221 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 SLC25A10Q9UBX3 287 aaPredicted RBP9.75□□□□□ -0.85
CDH1-210ENST00000566612 TRAPPC1Q9Y5R8 145 aa9.75□□□□□ -0.85
CDH1-210ENST00000566612 OTOGLQ3ZCN5 2332 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 K7N7A8 449 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 SS18L1O75177 396 aaPredicted RBP9.74□□□□□ -0.85
CDH1-210ENST00000566612 SRP19P09132 144 aaKnown RBP9.74□□□□□ -0.85
CDH1-210ENST00000566612 KIR2DL2P43627 348 aaPredicted RBP9.74□□□□□ -0.85
CDH1-210ENST00000566612 UBE2G1P62253 170 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 MST1LQ2TV78 715 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 DPPA3Q6W0C5 159 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 OR10A7Q8NGE5 316 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 ADTRPQ96IZ2 230 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 MANBALQ9NQG1 85 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 TRANK1O15050 2925 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 EML6Q6ZMW3 1958 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 IGHV3-48P01763 117 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 CD5P06127 495 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 KIR2DS2P43631 304 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 C16orf82Q7Z2V1 217 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 ZNF525Q8N782 197 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 VSIRQ9H7M9 311 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 BARX1Q9HBU1 254 aaPredicted RBP9.74□□□□□ -0.85
CDH1-210ENST00000566612 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 PXMP4Q9Y6I8 212 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 IGHV3-21A0A0B4J1V1 117 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 B4DEV8 164 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 FAM90A26D6RGX4 464 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 OR4A8P0C604 315 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 OR10J4P0C629 311 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 ORM2P19652 201 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 SPCS3P61009 180 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 TFF3Q07654 80 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 TEPPQ6URK8 271 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 Q6ZRM9 215 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 BTF3L4Q96K17 158 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 SIRT7Q9NRC8 400 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 FUT9Q9Y231 359 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 OR51B2Q9Y5P1 312 aa9.74□□□□□ -0.85
CDH1-210ENST00000566612 ADAMTS9Q9P2N4 1935 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 KIAA1324LA8MWY0 1029 aaPredicted RBP9.73□□□□□ -0.85
CDH1-210ENST00000566612 TGOLN2O43493 480 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 SELLP14151 372 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 FAM3BP58499 235 aaPredicted RBP9.73□□□□□ -0.85
CDH1-210ENST00000566612 VMA21Q3ZAQ7 101 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 NMSQ5H8A3 153 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 FAM53AQ6NSI3 398 aaPredicted RBP9.73□□□□□ -0.85
CDH1-210ENST00000566612 SLC24A4Q8NFF2 622 aa9.73□□□□□ -0.85
CDH1-210ENST00000566612 CMTM2Q8TAZ6 248 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms