RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 GPR137BO60478 399 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 OR2F2O95006 317 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 MOSP00540 346 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 MC5RP33032 325 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 EIF4EBP1Q13541 118 aaPredicted RBP9.18□□□□□ -0.94
KARS-207ENST00000566560 SURF2Q15527 256 aaPredicted RBP9.18□□□□□ -0.94
KARS-207ENST00000566560 OR2B11Q5JQS5 317 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 DHRS7BQ6IAN0 325 aaPredicted RBP9.18□□□□□ -0.94
KARS-207ENST00000566560 CCBE1Q6UXH8 406 aaPredicted RBP9.18□□□□□ -0.94
KARS-207ENST00000566560 PRIMA1Q86XR5 153 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 OR51H1Q8NH63 302 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 MARCH1Q8TCQ1 289 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 MRGPRFQ96AM1 343 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 RBMXL1Q96E39 390 aaKnown RBP9.18□□□□□ -0.94
KARS-207ENST00000566560 ZNF486Q96H40 463 aaPredicted RBP9.18□□□□□ -0.94
KARS-207ENST00000566560 EAF1Q96JC9 268 aaPredicted RBP9.18□□□□□ -0.94
KARS-207ENST00000566560 RAB18Q9NP72 206 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 SLC2A9Q9NRM0 540 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 C14orf166Q9Y224 244 aaKnown RBP9.18□□□□□ -0.94
KARS-207ENST00000566560 MOB4Q9Y3A3 225 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 PRELID3BQ9Y3B1 194 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 NF1P21359 2839 aa9.18□□□□□ -0.94
KARS-207ENST00000566560 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
KARS-207ENST00000566560 LYRM1O43325 122 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 IGKV1-16P04430 117 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 CTSDP07339 412 aaPredicted RBP9.17□□□□□ -0.94
KARS-207ENST00000566560 PI3P19957 117 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 KIR2DS2P43631 304 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 RPL30P62888 115 aaKnown RBP9.17□□□□□ -0.94
KARS-207ENST00000566560 EBI3Q14213 229 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 HNF4GQ14541 408 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 MMDQ15546 238 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 C16orf87Q6PH81 154 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 C16orf82Q7Z2V1 217 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 Q8N6K4 173 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 CCDC71LQ8N9Z2 235 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 ZFAND1Q8TCF1 268 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 DDB2Q92466 427 aa9.17□□□□□ -0.94
KARS-207ENST00000566560 RBM14Q96PK6 669 aaKnown RBP9.17□□□□□ -0.94
KARS-207ENST00000566560 LIN7CQ9NUP9 197 aaKnown RBP9.17□□□□□ -0.94
KARS-207ENST00000566560 ZFHX3Q15911 3703 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 PLA2G10O15496 165 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 FCGR3BO75015 233 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 PEX14O75381 377 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 PGLYRP1O75594 196 aaPredicted RBP9.16□□□□□ -0.94
KARS-207ENST00000566560 CRYZL1O95825 349 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 RRASP10301 218 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 BTCP35070 178 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 CCR6P51684 374 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 PIGPP57054 158 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 RND3P61587 244 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 RBMS2Q15434 407 aaKnown RBP9.16□□□□□ -0.94
KARS-207ENST00000566560 TBC1D26Q86UD7 250 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 POC5Q8NA72 575 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 OR4C13Q8NGP0 309 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 OR4S2Q8NH73 311 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 FLYWCH2Q96CP2 140 aaKnown RBP9.16□□□□□ -0.94
KARS-207ENST00000566560 HARBI1Q96MB7 349 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 SCGB3A2Q96PL1 93 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
KARS-207ENST00000566560 C5orf66Q9H5L9 145 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 COPZ2Q9P299 210 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 TBC1D24Q9ULP9 559 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 VSIG4Q9Y279 399 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 ATRQ13535 2644 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 CUBNO60494 3623 aa9.16□□□□□ -0.94
KARS-207ENST00000566560 NCBP2LA6PVI3 153 aaKnown RBP9.15□□□□□ -0.94
KARS-207ENST00000566560 M0QZK8 103 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 SHOXO15266 292 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 NBR2O15453 112 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 CRYBA1P05813 215 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 RIPPLY3P57055 190 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 RPL15P61313 204 aaKnown RBP9.15□□□□□ -0.94
KARS-207ENST00000566560 RPS16P62249 146 aaKnown RBP9.15□□□□□ -0.94
KARS-207ENST00000566560 ASAH1Q13510 395 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 SPAG16Q8N0X2 631 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 OR8H1Q8NGG4 311 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 ZFAND2BQ8WV99 257 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 SLC25A21Q9BQT8 299 aaPredicted RBP9.15□□□□□ -0.94
KARS-207ENST00000566560 NPFFR1Q9GZQ6 430 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 C1RLQ9NZP8 487 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 KIAA1456Q9P272 454 aa9.15□□□□□ -0.94
KARS-207ENST00000566560 H0Y980 276 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 RBFOX2O43251 390 aaKnown RBP eCLIP9.14□□□□□ -0.95
KARS-207ENST00000566560 FGF16O43320 207 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 RAMP3O60896 148 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 NDUFB6O95139 128 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 SPDEFO95238 335 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 F2RP25116 425 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 CNTFRP26992 372 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 DEFA1P59665 94 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 DEFA3P59666 94 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 IFITM3Q01628 133 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 TMEM177Q53S58 311 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 MZT2BQ6NZ67 158 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 TMED4Q7Z7H5 227 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 C5orf56Q8N8D9 126 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 CD300LFQ8TDQ1 290 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 RITA1Q96K30 269 aa9.14□□□□□ -0.95
KARS-207ENST00000566560 TSNAXQ99598 290 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms