RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GTSF1LQ9H1H1 148 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 ABCG5Q9H222 651 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF331Q9NQX6 463 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 SS18L2Q9UHA2 77 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 WASHC3Q9Y3C0 194 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 CACNG2Q9Y698 323 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 NRXN1Q9ULB1 1477 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 INO80Q9ULG1 1556 aaPredicted RBP2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 CLTCL1P53675 1640 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 LAMB2P55268 1798 aa2.31□□□□□ -2.04
HERPUD1-211ENST00000566550 EPG5Q9HCE0 2579 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 IGHV1-45A0A0A0MS14 117 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 IGHV7-4-1A0A0J9YVY3 117 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 PQLC2LA1A4F0 135 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 TMEM150BA6NC51 233 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 KNCNA6PVL3 124 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 DEDDO75618 318 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 S1PR2O95136 353 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 CRHP06850 196 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 IDO1P14902 403 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 CBR1P16152 277 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 MPIP34949 423 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 RPS10P46783 165 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 LHX2P50458 406 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 TCTAP57738 103 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 DEFA3P59666 94 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 SYCNQ0VAF6 134 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 FABP9Q0Z7S8 132 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 KLHL12Q53G59 568 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 PYCR3Q53H96 274 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 LPCAT3Q6P1A2 487 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 BAP18Q8IXM2 172 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 C20orf196Q8IYI0 205 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 Q8N976 141 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 LINC01555Q8NAE3 123 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 OR51H1Q8NH63 302 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 OR4A5Q8NH83 315 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 LHFPL5Q8TAF8 219 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 IMMP1LQ96LU5 166 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 GPR82Q96P67 336 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 NRTNQ99748 197 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 PLA2G2FQ9BZM2 168 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 MED28Q9H204 178 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 BOLA2Q9H3K6 86 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 BIN3Q9NQY0 253 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 KCNIP2Q9NS61 270 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 C21orf62Q9NYP8 219 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 MRPL27Q9P0M9 148 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 SMPXQ9UHP9 88 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF230Q9UIE0 474 aaPredicted RBP2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 CSAG2Q9Y5P2 127 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 HFM1A2PYH4 1435 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 EEA1Q15075 1411 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 C1orf167Q5SNV9 1468 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 PIK3C2BO00750 1634 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 TIAM2Q8IVF5 1701 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 FMN2Q9NZ56 1722 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 PARP4Q9UKK3 1724 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 PAPPA2Q9BXP8 1791 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 TCF20Q9UGU0 1960 aaKnown RBP2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 ABCA7Q8IZY2 2146 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 NAV2Q8IVL1 2488 aa2.3□□□□□ -2.04
HERPUD1-211ENST00000566550 CHD6Q8TD26 2715 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 FASNP49327 2511 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 CEP290O15078 2479 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 ARFGEF1Q9Y6D6 1849 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 AKAP12Q02952 1782 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TRPM1Q7Z4N2 1603 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 PXDNQ92626 1479 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 ADAMTS13Q76LX8 1427 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 A0A1B0GV50 99 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 EXOC1LA0A1B0GW35 172 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TMEM223A0PJW6 202 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 PPP5D1E7EU14 171 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TSTD3H0UI37 97 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TMEM250H0YL14 139 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 C15orf65H3BRN8 121 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 M0R381 172 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 FAAHO00519 579 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 HMGB3O15347 200 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 SOCS1O15524 211 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 ZNF207O43670 478 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 GAS8-AS1O95177 125 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 CRYZL1O95825 349 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 RNF224P0DH78 156 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 CCL1P22362 96 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 HIST1H1TP22492 207 aaPredicted RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 GATA2P23769 480 aaPredicted RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 S100GP29377 79 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 INPP1P49441 399 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 NUDT2P50583 147 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 KRTAP10-5P60370 271 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 GNB2P62879 340 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TFAMQ00059 246 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 TEX36Q5VZQ5 186 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 DAZ4Q86SG3 579 aaKnown RBP2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 DEFB125Q8N687 156 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 C12orf29Q8N999 325 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 CIRBP-AS1Q8TBR5 109 aa2.29□□□□□ -2.04
HERPUD1-211ENST00000566550 MAFIPQ8WZ33 124 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms