RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 LRFN3Q9BTN0 628 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 SMDT1Q9H4I9 107 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 LAMP3Q9UQV4 416 aa15.49■□□□□ 0.07
MSLN-207ENST00000566549 AKR1D1P51857 326 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 TDGF1P3P51864 188 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 TFF3Q07654 80 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 C3orf36Q3SXR2 165 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 TMEM41BQ5BJD5 291 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 PRAMEF5Q5TYX0 476 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 GFRALQ6UXV0 394 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 ZNF429Q86V71 674 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 TCTEX1D1Q8N7M0 179 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 OR10P1Q8NGE3 313 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 RAB39BQ96DA2 213 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 IL19Q9UHD0 177 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 HSPB1P04792 205 aaKnown RBP15.48■□□□□ 0.07
MSLN-207ENST00000566549 GATA4P43694 442 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 C17orf58Q2M2W7 97 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 OR6C3Q9NZP0 311 aa15.48■□□□□ 0.07
MSLN-207ENST00000566549 LOC102723971A0A1B0GUV8 181 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 PMS2P5A8MQ11 134 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 C16orf97H3BN30 126 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 F2RL2O00254 374 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 FGF7P21781 194 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 RAB11AP62491 216 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 SERF2P84101 59 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 ACSM6Q6P461 480 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 TRAV3A0A0B4J244 114 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 MAP1LC3B2A6NCE7 125 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 ZNF727A8MUV8 499 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 OR8U8P0C7N1 319 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 RPL35P42766 123 aaKnown RBP15.47■□□□□ 0.07
MSLN-207ENST00000566549 TMEM108Q6UXF1 575 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 ZNF561Q8N587 486 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 MAP1LC3BQ9GZQ8 125 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 UNKLQ9H9P5 680 aaKnown RBP15.47■□□□□ 0.07
MSLN-207ENST00000566549 PCNX1Q96RV3 2341 aa15.47■□□□□ 0.07
MSLN-207ENST00000566549 TRAV1-1A0A0B4J248 108 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 HPRT1P00492 218 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 DEFA4P12838 97 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 TNFSF4P23510 183 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 GNG10P50151 68 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 HABP2Q14520 560 aaPredicted RBP15.46■□□□□ 0.07
MSLN-207ENST00000566549 CR1LQ2VPA4 569 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 STUMQ69YW2 141 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 SPACA3Q8IXA5 215 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 RPP25LQ8N5L8 163 aaKnown RBP15.46■□□□□ 0.07
MSLN-207ENST00000566549 GAFA1Q96PS6 74 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 S1PR3Q99500 378 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 TMEM147Q9BVK8 224 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 SLC25A22Q9H936 323 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 BCL2P10415 239 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 ERVFRD-1P60508 538 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 BSPH1Q075Z2 132 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 KHDC3LQ587J8 217 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 CT45A1Q5HYN5 189 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 MRGPRGQ86SM5 289 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 ZGRF1Q86YA3 2104 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 KDF1Q8NAX2 398 aaPredicted RBP15.46■□□□□ 0.07
MSLN-207ENST00000566549 OR4A16Q8NH70 328 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 CT45A3Q8NHU0 189 aa15.46■□□□□ 0.07
MSLN-207ENST00000566549 CIB3Q96Q77 187 aaPredicted RBP15.46■□□□□ 0.07
MSLN-207ENST00000566549 SAA2-SAA4A0A096LPE2 208 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 TRGV10A0A0A0MS01 117 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 DPRXA6NFQ7 191 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 SAA2P0DJI9 122 aaPredicted RBP15.45■□□□□ 0.06
MSLN-207ENST00000566549 TAGLN2P37802 199 aaKnown RBP15.45■□□□□ 0.06
MSLN-207ENST00000566549 ADAM5Q6NVV9 412 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 FAM222BQ8WU58 562 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 NIPSNAP3BQ9BS92 247 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 KBTBD11-OT1A0A1B0GTJ5 212 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 MMP23AO75900 390 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 MT-ND4LP03901 98 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 OR4A8P0C604 315 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 CGB3P0DN86 165 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 CGB7P0DN87 165 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 DLK1P80370 383 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 TCF23Q7RTU1 214 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 LYG1Q8N1E2 194 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 MBD3L1Q8WWY6 194 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 LHX4Q969G2 390 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 PINX1Q96BK5 328 aaKnown RBP15.45■□□□□ 0.06
MSLN-207ENST00000566549 SCNM1Q9BWG6 230 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 HIPK2Q9H2X6 1198 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 TMPRSS5Q9H3S3 457 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 SLC39A9Q9NUM3 307 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 GFOD1Q9NXC2 390 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 ZNRD1Q9P1U0 126 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 DSCAMO60469 2012 aa15.45■□□□□ 0.06
MSLN-207ENST00000566549 OR2C1O95371 312 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 IRF2P14316 349 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 PAX6P26367 422 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 SDSLQ96GA7 329 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 PARD6GQ9BYG4 376 aaPredicted RBP15.44■□□□□ 0.06
MSLN-207ENST00000566549 C15orf62A8K5M9 175 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 TMPRSS2O15393 492 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 PTAFRP25105 342 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 ERVK-16P61578 105 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 ADIPOQQ15848 244 aa15.44■□□□□ 0.06
MSLN-207ENST00000566549 EGLN1Q9GZT9 426 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms